RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RTP5Q14D33 572 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 DND1Q8IYX4 353 aaKnown RBP13.38□□□□□ -0.27
CBX3-201ENST00000337620 PSMF1Q92530 271 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 FER1L6-AS2Q96M78 137 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 PLA2G12AQ9BZM1 189 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 ADAM19Q9H013 955 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 IMPAD1Q9NX62 359 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 TAS2R10Q9NYW0 307 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 HSPE1-MOB4S4R3N1 261 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 UNC119BA6NIH7 251 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 ENO4A6NNW6 628 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 B4DXG7 233 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 CCL3P10147 92 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 CXCR1P25024 350 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 NUP107P57740 925 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 CDC42P60953 191 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 SRSF6Q13247 344 aaKnown RBP13.37□□□□□ -0.27
CBX3-201ENST00000337620 CDK5R2Q13319 367 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 INPP5JQ15735 1006 aaPredicted RBP13.37□□□□□ -0.27
CBX3-201ENST00000337620 C6orf141Q5SZD1 244 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 JMJD6Q6NYC1 403 aaPredicted RBP13.37□□□□□ -0.27
CBX3-201ENST00000337620 TMPRSS11FQ6ZWK6 438 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 ENTHD1Q8IYW4 607 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 IQCF1Q8N6M8 205 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 TEX47Q8TBZ9 253 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 ZNF696Q9H7X3 374 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 STMN3Q9NZ72 180 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 RNF6Q9Y252 685 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 ANKUB1A6NFN9 424 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 EFCAB9A8MZ26 197 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 M0R129 80 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 GIPRP48546 466 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 AIMP2Q13155 320 aaKnown RBP13.37□□□□□ -0.27
CBX3-201ENST00000337620 GINS1Q14691 196 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 MAD2L1BPQ15013 274 aaPredicted RBP13.37□□□□□ -0.27
CBX3-201ENST00000337620 CLEC12AQ5QGZ9 265 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 SLC22A10Q63ZE4 541 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 DEPDC4Q8N2C3 294 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 CCNL2Q96S94 520 aaPredicted RBP13.37□□□□□ -0.27
CBX3-201ENST00000337620 SECISBP2Q96T21 854 aaKnown RBP13.37□□□□□ -0.27
CBX3-201ENST00000337620 IL20RAQ9UHF4 553 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 OSGIN1Q9UJX0 560 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 HRH3Q9Y5N1 445 aa13.37□□□□□ -0.27
CBX3-201ENST00000337620 WISP1O95388 367 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 PRKAR1AP10644 381 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 FOXC1Q12948 553 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 SNTA1Q13424 505 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 SLC30A6Q6NXT4 461 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 ARSKQ6UWY0 536 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 CASP12Q6UXS9 341 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 MDGA2Q7Z553 956 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 CYP4Z2PQ8N1L4 340 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 BEST3Q8N1M1 668 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 PAQR8Q8TEZ7 354 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 TBC1D23Q9NUY8 699 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 VDAC3Q9Y277 283 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 IGKV1D-42A0A075B6H8 117 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 G3V3Y1 287 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 NKX2-8O15522 239 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 F10P00742 488 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 MSX1P28360 303 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 FMO3P31513 532 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 POLR2HP52434 150 aaKnown RBP13.36□□□□□ -0.27
CBX3-201ENST00000337620 SUMO3P55854 103 aaPredicted RBP13.36□□□□□ -0.27
CBX3-201ENST00000337620 OC90Q02509 493 aaPredicted RBP13.36□□□□□ -0.27
CBX3-201ENST00000337620 SLX4IPQ5VYV7 408 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 LAIR2Q6ISS4 152 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 ZNF620Q6ZNG0 422 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 PTCHD4Q6ZW05 846 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 BPIFB6Q8NFQ5 453 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 OR8D4Q8NGM9 314 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 OR13C2Q8NGS9 318 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 OR51A7Q8NH64 312 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 FBLIM1Q8WUP2 373 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 TMEM234Q8WY98 164 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 HDAC2Q92769 488 aaKnown RBP13.36□□□□□ -0.27
CBX3-201ENST00000337620 OSTF1Q92882 214 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 SGTBQ96EQ0 304 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 SGCZQ96LD1 299 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 SAMD8Q96LT4 415 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 TSSK6Q9BXA6 273 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 LHPPQ9H008 270 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 C12orf10Q9HB07 376 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 CPNE5Q9HCH3 593 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 ZNF226Q9NYT6 803 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 IL20Q9NYY1 176 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 TVP23BQ9NYZ1 205 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 KLK13Q9UKR3 277 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 CDH10Q9Y6N8 788 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 DOCK10Q96BY6 2186 aa13.36□□□□□ -0.27
CBX3-201ENST00000337620 ARGFXA6NJG6 315 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 LRRN3E7EW58 273 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 CH25HO95992 272 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 ATP6V1B1P15313 513 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 SMSP52788 366 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 CDK5Q00535 292 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 BLMHQ13867 455 aa13.35□□□□□ -0.27
CBX3-201ENST00000337620 RBM48Q5RL73 367 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms