RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 NRAPQ86VF7 1730 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 AQP2P41181 271 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 UBE2IP63279 158 aaKnown RBP15.03■□□□□ -0
NPHP3-201ENST00000337331 ABCA11PQ4W5N1 156 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 ADAM5Q6NVV9 412 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 PRSS45Q7RTY3 260 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 OR4K17Q8NGC6 315 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 THAP4Q8WY91 577 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SAMD8Q96LT4 415 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SORCS2Q96PQ0 1159 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 PITX2Q99697 317 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SLC38A1Q9H2H9 487 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 TJP1Q07157 1748 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 OR52A4PA6NMU1 304 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 TSTD3H0UI37 97 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 CSTBP04080 98 aaKnown RBP15.02■□□□□ -0
NPHP3-201ENST00000337331 HCKP08631 526 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 AOAHP28039 575 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 SEC61A1P61619 476 aaKnown RBP15.02■□□□□ -0
NPHP3-201ENST00000337331 KCTD18Q6PI47 426 aaPredicted RBP15.02■□□□□ -0
NPHP3-201ENST00000337331 CYHR1Q6ZMK1 362 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 LMNTD1Q8N9Z9 388 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 AVL9Q8NBF6 648 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 OR4F15Q8NGB8 312 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 C14orf79Q96F83 325 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 EVA1AQ9H8M9 152 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 RNH1P13489 461 aaKnown RBP15.02■□□□□ -0
NPHP3-201ENST00000337331 S1PR1P21453 382 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 GABRA5P31644 462 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 CLINT1Q14677 625 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 TRAM1Q15629 374 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.02■□□□□ -0
NPHP3-201ENST00000337331 EIF2S3LQ2VIR3 472 aaKnown RBP15.02■□□□□ -0
NPHP3-201ENST00000337331 ALG10BQ5I7T1 473 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 DUSP18Q8NEJ0 188 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 HS6ST2Q96MM7 605 aa15.02■□□□□ -0
NPHP3-201ENST00000337331 MTHFD2LQ9H903 347 aaPredicted RBP15.02■□□□□ -0
NPHP3-201ENST00000337331 FAM74A7A6NL05 159 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 IGFBP1P08833 259 aaPredicted RBP15.02□□□□□ -0.01
NPHP3-201ENST00000337331 GTF2F2P13984 249 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 GNSP15586 552 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 HBA1P69905 142 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 FAM74A3Q4VXF1 159 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 OR5M10Q6IEU7 315 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 EIF5AL1Q6IS14 154 aaKnown RBP15.02□□□□□ -0.01
NPHP3-201ENST00000337331 C12orf40Q86WS4 652 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 NANOGP1Q8N7R0 232 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 OR2T4Q8NH00 348 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 TSACCQ96A04 125 aaPredicted RBP15.02□□□□□ -0.01
NPHP3-201ENST00000337331 GPR137Q96N19 417 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 SLC46A2Q9BY10 475 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 GABARAPL1Q9H0R8 117 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 HRH4Q9H3N8 390 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 NDUFB11Q9NX14 153 aa15.02□□□□□ -0.01
NPHP3-201ENST00000337331 PTPRZ1P23471 2315 aaPredicted RBP15.02□□□□□ -0.01
NPHP3-201ENST00000337331 CERS1P27544 350 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 SHC1P29353 583 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 WDR5P61964 334 aaKnown RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 PGAP1Q75T13 922 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 TMEM156Q8N614 296 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 NAXEQ8NCW5 288 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 AKR7LQ8NHP1 331 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 ATOH1Q92858 354 aaPredicted RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 FOXJ1Q92949 421 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 MACROD1Q9BQ69 325 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 G6PC3Q9BUM1 346 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 CXXC1Q9P0U4 656 aaPredicted RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 TRABD2BA6NFA1 517 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 UBBP0CG47 229 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 UBCP0CG48 685 aaKnown RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 GDNFP39905 211 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 RPS15AP62244 130 aaKnown RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 SHC2P98077 582 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 RUNX3Q13761 415 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 SGCBQ16585 318 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 OR11H7Q8NGC8 314 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 SLC17A9Q9BYT1 436 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 NXF2Q9GZY0 626 aaKnown RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 LHX3Q9UBR4 397 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 AK6Q9Y3D8 172 aaKnown RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 ASB1Q9Y576 335 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 SLC22A23A1A5C7 686 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 TRAPPC13A5PLN9 417 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 MC3RP41968 323 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 LUMP51884 338 aaPredicted RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 NKAPLQ5M9Q1 402 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 GLT8D1Q68CQ7 371 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 LAMTOR1Q6IAA8 161 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 THRSPQ92748 146 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 MSLNLQ96KJ4 702 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 C20orf85Q9H1P6 137 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 DLL4Q9NR61 685 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 TMEM184CQ9NVA4 438 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 KLHL42Q9P2K6 505 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 SERTAD3Q9UJW9 196 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 ADAMTS7Q9UKP4 1686 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 IFNA21P01568 189 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 KLKB1P03952 638 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 SNRPBP14678 240 aaKnown RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 SUOXP51687 545 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms