RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ALPK2Q86TB3 2170 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 GPRIN2O60269 458 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 MAS1P04201 325 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 LCKP06239 509 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 TIMD4Q96H15 378 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 MUS81Q96NY9 551 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ZNF223Q9UK11 482 aaPredicted RBP11.49□□□□□ -0.57
FN1-202ENST00000336916 NUBP2Q9Y5Y2 271 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 KMT2EQ8IZD2 1858 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 SCN5AQ14524 2016 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 MYADML2A6NDP7 307 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 NKX6-3A6NJ46 265 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 H0YIV9 168 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 UBCP0CG48 685 aaKnown RBP11.49□□□□□ -0.57
FN1-202ENST00000336916 ARSAP15289 507 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ZNF14P17017 642 aaPredicted RBP11.49□□□□□ -0.57
FN1-202ENST00000336916 INHBCP55103 352 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ARL11Q969Q4 196 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 NKX3-1Q99801 234 aaPredicted RBP11.49□□□□□ -0.57
FN1-202ENST00000336916 LYRM4Q9HD34 91 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 CD8B2A6NJW9 211 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 SLC9B1P1A6NJY1 282 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 CACNG3O60359 315 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 CD8BP10966 210 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 UGT2B7P16662 529 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 FUT1P19526 365 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 SLC2A5P22732 501 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ADH7P40394 386 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 SLC46A3Q7Z3Q1 461 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 KIAA1958Q8N8K9 716 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 POGLUT1Q8NBL1 392 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 SLC6A18Q96N87 628 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ULBP2Q9BZM5 246 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ANKRD19PQ9H560 264 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 COL24A1Q17RW2 1714 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 LILRB5O75023 590 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 MT-ATP6P00846 226 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 NKAIN3Q8N8D7 197 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 FNDC9Q8TBE3 224 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 HEBP1Q9NRV9 189 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 DOCK11Q5JSL3 2073 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ARGFXA6NJG6 315 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 FAM155AB1AL88 458 aaPredicted RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 CATR1Q13166 79 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 ZNF648Q5T619 568 aaPredicted RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 LSMEM2Q8N112 164 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 DMRTB1Q96MA1 342 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 OTOL1A6NHN0 477 aaPredicted RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 H3BQ06 376 aaPredicted RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 GABARAPH6UMI1 98 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 GABARAPO95166 117 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 SLC10A2Q12908 348 aaPredicted RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 SLC35F3Q8IY50 421 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 ASCC1Q8N9N2 400 aaKnown RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 OR1S1Q8NH92 325 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 BPIFA2Q96DR5 249 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 NSUN5Q96P11 429 aaKnown RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 DNAJC15Q9Y5T4 150 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 PPP1R3DO95685 299 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 STK11Q15831 433 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 NKPD1Q17RQ9 610 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 LETMD1Q6P1Q0 360 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 ADOQ96SZ5 270 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 ERVK13-1Q9NX77 482 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 OLIG2Q13516 323 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 DEFB133Q30KQ1 61 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 METAP1DQ6UB28 335 aaPredicted RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 LRFN1Q9P244 771 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 MARCH4Q9P2E8 410 aaPredicted RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 I3L521 148 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 AMY2AP04746 511 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 DNASE1P24855 282 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 TAS2R19P59542 299 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 SLC5A12Q1EHB4 618 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 KIAA1211LQ6NV74 962 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 RNF175Q8N4F7 328 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 SNX18Q96RF0 628 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 OBP2BQ9NPH6 170 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 ZNF236Q9UL36 1845 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 PAHP00439 452 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 WASH6PQ9NQA3 447 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 SHANK3Q9BYB0 1731 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 MROH6A6NGR9 719 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 HTR3BO95264 441 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 CHRM4P08173 479 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 AKR1C4P17516 323 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 GRB2P62993 217 aaKnown RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 ADARB1P78563 741 aaKnown RBP11.48□□□□□ -0.57
FN1-202ENST00000336916 CDKN3Q16667 212 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 ZNF286AQ9HBT8 521 aa11.48□□□□□ -0.57
FN1-202ENST00000336916 HMX3A6NHT5 357 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 GABRR3A8MPY1 467 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 RDH16O75452 317 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 DDAH2O95865 285 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 LAMP1P11279 417 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 HOXD9P28356 352 aaPredicted RBP11.47□□□□□ -0.57
FN1-202ENST00000336916 SGSHP51688 502 aa11.47□□□□□ -0.57
FN1-202ENST00000336916 TBC1D28Q2M2D7 210 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms