RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 HNRNPRO43390 633 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 KRT36O76013 467 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 LYPD3O95274 346 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 CST1P01037 141 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 CRYABP02511 175 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 ADH6P28332 368 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 POLR2HP52434 150 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 B3GALT5-AS1P59052 145 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 ALDH6A1Q02252 535 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 ST3GAL3Q11203 375 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 CMPK2Q5EBM0 449 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 SWT1Q5T5J6 900 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 POMZP3Q6PJE2 187 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 ZNF605Q86T29 641 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 ATG4DQ86TL0 474 aaPredicted RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 OFCC1Q8IZS5 231 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 CISD2Q8N5K1 135 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 PIK3C3Q8NEB9 887 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 NR4A3Q92570 626 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 UBL7Q96S82 380 aaPredicted RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 PIGQQ9BRB3 760 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 TSPAN10Q9H1Z9 355 aaPredicted RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 ACKR4Q9NPB9 350 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 SLC7A7Q9UM01 511 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 RRP15Q9Y3B9 282 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 TESMINQ9Y4I5 508 aa12.41□□□□□ -0.42
TUBA1B-202ENST00000336023 TMED7-TICAM2A0A0A6YYA0 188 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 CHP2O43745 196 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 H1F0P07305 194 aaKnown RBP12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 THRBP10828 461 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 ZNF17P17021 662 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 RRM2P31350 389 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 APOBEC1P41238 236 aaKnown RBP12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 SPIBQ01892 262 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 OR2T5Q6IEZ7 315 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 AAGABQ6PD74 315 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 FAM180AQ6UWF9 173 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 LSRQ86X29 649 aaPredicted RBP12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 ADGRG3Q86Y34 549 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 SIAH3Q8IW03 269 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 OR2T29Q8NH02 315 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 SLC38A4Q969I6 547 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 DHRS1Q96LJ7 313 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 SFXN2Q96NB2 322 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 SLC6A15Q9H2J7 730 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 C12orf10Q9HB07 376 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 MAN2C1Q9NTJ4 1040 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 TMED7Q9Y3B3 224 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 ELOA3DA6NLF2 546 aaPredicted RBP12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 NPIPA5E9PKD4 350 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 ADAMDEC1O15204 470 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 CLOCKO15516 846 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 EFNA2O43921 213 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 WISP2O76076 250 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 PNMTP11086 282 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 FCGR1AP12314 374 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 CCNA2P20248 432 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 IL11P20809 199 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 CXCR1P25024 350 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 FASP25445 335 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 TRAM2Q15035 370 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 ELOA3BQ3SY89 546 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 WDR88Q6ZMY6 472 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 NKAIN4Q8IVV8 208 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 ELOA3Q8NG57 546 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 OR52J3Q8NH60 311 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 LRTOMTQ8WZ04 291 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 MPP4Q96JB8 637 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 PRSS27Q9BQR3 290 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 LDAHQ9H6V9 325 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 DNAJB9Q9UBS3 223 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 NPIPA1Q9UND3 350 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 SLC6A5Q9Y345 797 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 ZNF337Q9Y3M9 751 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
TUBA1B-202ENST00000336023 MED12Q93074 2177 aa12.4□□□□□ -0.43
TUBA1B-202ENST00000336023 A0A087WUJ7 227 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 TRGV5A0A0B4J1U4 118 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 A0A1W2PRQ8 180 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 GNGT2O14610 69 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 SUSD5O60279 629 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 DEAF1O75398 565 aaPredicted RBP12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 GADD45GO95257 159 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 LDLRP01130 860 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 IGHG3P01860 377 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 ELK4P28324 431 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 GFRA1P56159 465 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 SMIM11AP58511 58 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 DGCR6Q14129 220 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 ATP6AP1Q15904 470 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 FGD3Q5JSP0 725 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 LINC00114Q6XXX2 140 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 TRILQ7L0X0 811 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 SNRNP40Q96DI7 357 aaKnown RBP12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 ANKRD19PQ9H560 264 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 TMEM185BQ9H7F4 350 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 REEP1Q9H902 201 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 SERINC1Q9NRX5 453 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 AGPAT4Q9NRZ5 378 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 VNN3Q9NY84 501 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms