RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 MARVELD3Q96A59 401 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 SRMSQ9H3Y6 488 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 CHST2Q9Y4C5 530 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 CACNG2Q9Y698 323 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 SIRT4Q9Y6E7 314 aaPredicted RBP15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 RIIAD1A6NNX1 92 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 MT-ND5P03915 603 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 RAB3AP20336 220 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 MEPCEQ7L2J0 689 aaKnown RBP15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 GID4Q8IVV7 300 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 FAM181AQ8N9Y4 354 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 BEST4Q8NFU0 473 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR13C2Q8NGS9 318 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 COQ8AQ8NI60 647 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 ATOH1Q92858 354 aaPredicted RBP15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 FGF13Q92913 245 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 C4orf36Q96KX1 117 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 ARHGDIGQ99819 225 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 HCAR1Q9BXC0 346 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 MRPS18AQ9NVS2 196 aaKnown RBP15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 SDHAF2Q9NX18 166 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 COL4A6Q14031 1691 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 LANCL1O43813 399 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 RRASP10301 218 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 PRKAR1BP31321 381 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF169Q14929 603 aaPredicted RBP15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 MFSD12Q6NUT3 480 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 METAP1DQ6UB28 335 aaPredicted RBP15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF836Q6ZNA1 936 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR52N1Q8NH53 320 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 TRMT10AQ8TBZ6 339 aaKnown RBP15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 TMEM239Q8WW34 195 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 HS6ST2Q96MM7 605 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 HDAC8Q9BY41 377 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZCCHC4Q9H5U6 513 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 C20orf141Q9NUB4 165 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 FBXL2Q9UKC9 423 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 ERVK-19Q9WJR5 959 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 COLEC10Q9Y6Z7 277 aa15.32■□□□□ 0.04
CDC42EP4-201ENST00000335793 E9PI62 339 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 PEX12O00623 359 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 SGCEO43556 437 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 MPC2O95563 127 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 IFNA7P01567 189 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 BMP8BP34820 402 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 RPE65Q16518 533 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 ENPP7Q6UWV6 458 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 FRRS1Q6ZNA5 592 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC16A13Q7RTY0 426 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 BMP8AQ7Z5Y6 402 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 LUZP2Q86TE4 346 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 NR4A3Q92570 626 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 SMARCD2Q92925 531 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 C1QTNF2Q9BXJ5 285 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 IGFLR1Q9H665 355 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 HCN3Q9P1Z3 774 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 TMEM5Q9Y2B1 443 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 DENND4CQ5VZ89 1909 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 CHURC1-FNTBB4DL54 471 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 EIF4EP06730 217 aaKnown RBP15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 PITPNBP48739 271 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 HCCSP53701 268 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR12D2P58182 307 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 MRPL2Q5T653 305 aaKnown RBP15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 GPR135Q8IZ08 494 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 TOMM5Q8N4H5 51 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 FAM98AQ8NCA5 519 aaKnown RBP15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR13C5Q8NGS8 318 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 MS4A4EQ96PG1 132 aa15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 SPRTNQ9H040 489 aaPredicted RBP15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 MRPL15Q9P015 296 aaKnown RBP15.31■□□□□ 0.04
CDC42EP4-201ENST00000335793 TRAPPC13A5PLN9 417 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 THY1P04216 161 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ACTR1BP42025 376 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 CLDN20P56880 219 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ACTR1AP61163 376 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 E2F1Q01094 437 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR1Q1Q15612 314 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ASPGQ86U10 573 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 PTP4A1Q93096 173 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 CXorf58Q96LI9 332 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 RSPH9Q9H1X1 276 aaPredicted RBP15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC6A15Q9H2J7 730 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 FBXO34Q9NWN3 711 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ASB6Q9NWX5 421 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 FBXL4Q9UKA2 621 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 PRUNE2Q8WUY3 3088 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 RPS10-NUDT3A0A1W2PQS6 291 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC22A23A1A5C7 686 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 FAM74A7A6NL05 159 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZIC2O95409 532 aaPredicted RBP15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 TBXA2RP21731 343 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 MAOBP27338 520 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 MAPK14Q16539 360 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 FAM74A3Q4VXF1 159 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 AGBL4Q5VU57 503 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 CD200R1LQ6Q8B3 271 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ESPNLQ6ZVH7 1005 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 IZUMO1Q8IYV9 350 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC44A3Q8N4M1 653 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms