RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SLC5A7Q9GZV3 580 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF696Q9H7X3 374 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 C13orf42A0A1B0GVH6 325 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 PRH1P02810 166 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 IL32P24001 234 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 DLSTP36957 453 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 CXCR4P61073 352 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 SQSTM1Q13501 440 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 XKR7Q5GH72 579 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 LAS2Q8IYD9 372 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 FUNDC2Q9BWH2 189 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 TCEAL2Q9H3H9 227 aaPredicted RBP13.95□□□□□ -0.18
C9orf47-201ENST00000334490 A0A1B0GWA3 101 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 MEGF11A6BM72 1044 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 PITPNBP48739 271 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 TSPAN31Q12999 210 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 RAB11BQ15907 218 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 TCTN1Q2MV58 587 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 AAED1Q7RTV5 226 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 SPRED2Q7Z698 418 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF554Q86TJ5 538 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 RNF113BQ8IZP6 322 aaKnown RBP13.94□□□□□ -0.18
C9orf47-201ENST00000334490 ZADH2Q8N4Q0 377 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 TEX19Q8NA77 164 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 OLIG1Q8TAK6 271 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 PARPBPQ9NWS1 579 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 MRPS2Q9Y399 296 aaKnown RBP13.94□□□□□ -0.18
C9orf47-201ENST00000334490 ASXL3Q9C0F0 2248 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 TMED7-TICAM2A0A0A6YYA0 188 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 CSF2P04141 144 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 RBM34P42696 430 aaKnown RBP13.94□□□□□ -0.18
C9orf47-201ENST00000334490 PLAG1Q6DJT9 500 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 VASNQ6EMK4 673 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 MARCH3Q86UD3 253 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 FAM217AQ8IXS0 508 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 GPR148Q8TDV2 347 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 FAM46BQ96A09 425 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 RFT1Q96AA3 541 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 ALG14Q96F25 216 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 KATNB1Q9BVA0 655 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 MED11Q9P086 117 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 TMED7Q9Y3B3 224 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 DCDC2BA2VCK2 349 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 KRBA1A5PL33 1030 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 FGF17O60258 216 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 MPLP40238 635 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 B4GALNT1Q00973 533 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 KCTD9Q7L273 389 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 FBXL6Q8N531 539 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 OR9K2Q8NGE7 335 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 C8orf44Q96CB5 159 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 HCAR1Q9BXC0 346 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 SLC22A7Q9Y694 548 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 EEF1E1O43324 174 aaKnown RBP13.94□□□□□ -0.18
C9orf47-201ENST00000334490 PIAS2O75928 621 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 TNFSF15O95150 251 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 GPX2P18283 190 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM71Q6P5X7 295 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 PLCZ1Q86YW0 608 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 SLC2A12Q8TD20 617 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 NUDT8Q8WV74 236 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 MUCL1Q96DR8 90 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 CCDC120Q96HB5 630 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 LMF1Q96S06 567 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 UBAP1Q9NZ09 502 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 KCNS2Q9ULS6 477 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
C9orf47-201ENST00000334490 MTCH2Q9Y6C9 303 aa13.94□□□□□ -0.18
C9orf47-201ENST00000334490 PSMB10P40306 273 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 AWAT2Q6E213 333 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF322Q6U7Q0 402 aaPredicted RBP13.93□□□□□ -0.18
C9orf47-201ENST00000334490 B3GNT7Q8NFL0 401 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 OR8H1Q8NGG4 311 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 EGLN3Q9H6Z9 239 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 PRAMEF25A6NGN4 478 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 ARGFXA6NJG6 315 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 AQP2P41181 271 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 DUSP5Q16690 384 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 SLC22A16Q86VW1 577 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 PAPD5Q8NDF8 572 aaKnown RBP13.93□□□□□ -0.18
C9orf47-201ENST00000334490 TNFRSF13CQ96RJ3 184 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 ASIC5Q9NY37 505 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 MBD2Q9UBB5 411 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 NPFFR2Q9Y5X5 522 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 R4GN57 208 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 LOC102725191A0A1B0GVB3 256 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 SYT5O00445 386 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 SLC43A1O75387 559 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 TPOP07202 933 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 MSX1P28360 303 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 PRKAR1BP31321 381 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 CD97P48960 835 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 CLDN17P56750 224 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 C5orf46Q6UWT4 87 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 PELI3Q8N2H9 469 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF615Q8N8J6 731 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 INO80EQ8NBZ0 244 aaPredicted RBP13.93□□□□□ -0.18
C9orf47-201ENST00000334490 UTP4Q969X6 686 aaKnown RBP13.93□□□□□ -0.18
C9orf47-201ENST00000334490 CCDC74BQ96LY2 380 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms