RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ATP13A2Q9NQ11 1180 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 ABCB10Q9NRK6 738 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 KCND3Q9UK17 655 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF292O60281 2723 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 NPIPA5A0A0B4J1W7 369 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 TRBV11-1A0A0K0K1C0 115 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 LOC101059948A0A1B0GTJ6 334 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 NPIPA7E9PJI5 369 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 GNGT2O14610 69 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 ZFAND5O76080 213 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 DIRAS1O95057 198 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 NGFRP08138 427 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 NPIPA8P0DM63 369 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 ERP29P30040 261 aaKnown RBP11.71□□□□□ -0.53
DDX39A-202ENST00000324340 ADH7P40394 386 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 CLK3P49761 638 aaKnown RBP11.71□□□□□ -0.53
DDX39A-202ENST00000324340 HMGA2P52926 109 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 PNLIPRP2P54317 469 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 RPS18P62269 152 aaKnown RBP11.71□□□□□ -0.53
DDX39A-202ENST00000324340 GALK2Q01415 458 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 TAGLNQ01995 201 aaKnown RBP11.71□□□□□ -0.53
DDX39A-202ENST00000324340 PLAURQ03405 335 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 FGFBP1Q14512 234 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 RTP5Q14D33 572 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 CTU2Q2VPK5 515 aaKnown RBP11.71□□□□□ -0.53
DDX39A-202ENST00000324340 KLHL26Q53HC5 615 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 LAIR2Q6ISS4 152 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 GDPD3Q7L5L3 318 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 CMIPQ8IY22 773 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 OR6T1Q8NGN1 323 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 EPYCQ99645 322 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 TMEM246Q9BRR3 403 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 UBQLN4Q9NRR5 601 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.53
DDX39A-202ENST00000324340 ACOXLQ9NUZ1 547 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 KLHL28Q9NXS3 571 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 VNN3Q9NY84 501 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 IL20Q9NYY1 176 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 SLC13A4Q9UKG4 626 aa11.71□□□□□ -0.53
DDX39A-202ENST00000324340 PCSK5Q92824 1860 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 NSG1A0A0A6YYJ2 146 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 EFCAB9A8MZ26 197 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 M0R3H8 397 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 FFAR1O14842 300 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 ARHGEF9O43307 516 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 RGS10O43665 173 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 HPP00738 406 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 NAGAP17050 411 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 FPR1P21462 350 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 TBXA2RP21731 343 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 SDHBP21912 280 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 ABCD3P28288 659 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 DNAJA1P31689 397 aaKnown RBP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 LIMS1P48059 325 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 RFX3P48380 749 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 TEKQ02763 1124 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 MEP1AQ16819 746 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 RSPO4Q2I0M5 234 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 BTBD16Q32M84 506 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 CEP78Q5JTW2 689 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 PDZK1Q5T2W1 519 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 MRPL2Q5T653 305 aaKnown RBP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 FNDC7Q5VTL7 733 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 SHQ1Q6PI26 577 aaKnown RBP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 TMEM179BQ7Z7N9 219 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 RBM45Q8IUH3 476 aaKnown RBP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 ELMOD2Q8IZ81 293 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 ARMC10Q8N2F6 343 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 PSD4Q8NDX1 1056 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 OR4C15Q8NGM1 316 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 OR4C3Q8NH37 302 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 VANGL1Q8TAA9 524 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 ADAMTS17Q8TE56 1095 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 NR4A3Q92570 626 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 OMA1Q96E52 524 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 ST6GAL2Q96JF0 529 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 DCSTAMPQ9H295 470 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 NIPAL2Q9H841 368 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 REEP1Q9H902 201 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 DDX28Q9NUL7 540 aaKnown RBP11.7□□□□□ -0.54
DDX39A-202ENST00000324340 ACER3Q9NUN7 267 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 RLIMQ9NVW2 624 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 MYOTQ9UBF9 498 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 A4GNTQ9UNA3 340 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 LYVE1Q9Y5Y7 322 aa11.7□□□□□ -0.54
DDX39A-202ENST00000324340 A0A075B6Q4 140 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 CDC14CA4D256 554 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 OR6C70A6NIJ9 312 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 J3KTA2 159 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 TBX1O43435 398 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 TPST2O60704 377 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 REM1O75628 298 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 ANGPTL1O95841 491 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 CYP4B1P13584 511 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 ICAM2P13598 275 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 CTRB1P17538 263 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 IL12BP29460 328 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 OTX2P32243 289 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms