RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 LCMT2O60294 686 aaKnown RBP13.71□□□□□ -0.21
TCOF1-201ENST00000323668 LILRB3O75022 631 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 OLFM2O95897 454 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 CRYBB2P43320 205 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 DLX5P56178 289 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 RAB11BQ15907 218 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 ZNF77Q15935 545 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 DEFB110Q30KQ9 67 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 ZNF542PQ5EBM4 170 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 EOGTQ5NDL2 527 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 LRFN4Q6PJG9 635 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 TMEM205Q6UW68 189 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 ZDHHC1Q8WTX9 485 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 CMKLR1Q99788 373 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 SEC61A2Q9H9S3 476 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 F5H0A9 414 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-201ENST00000323668 EIF1AYO14602 144 aaKnown RBP13.71□□□□□ -0.21
TCOF1-201ENST00000323668 PIP5K1CO60331 668 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 RDH16O75452 317 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 SC5DO75845 299 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 CTSLP07711 333 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 HBQ1P09105 142 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 EVI2BP34910 448 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 KIR2DL3P43628 341 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 RNASE11Q8TAA1 199 aaKnown RBP13.71□□□□□ -0.21
TCOF1-201ENST00000323668 KLHL15Q96M94 604 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 WDFY2Q96P53 400 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 HDAC8Q9BY41 377 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 PLSCR3Q9NRY6 295 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 NUP50Q9UKX7 468 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 URB1O60287 2271 aaKnown RBP13.71□□□□□ -0.21
TCOF1-201ENST00000323668 MAN2B1O00754 1011 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 PHYHO14832 338 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 FBXO45P0C2W1 286 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 F3P13726 295 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 EIF1AXP47813 144 aaKnown RBP13.71□□□□□ -0.21
TCOF1-201ENST00000323668 GPR50Q13585 617 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 FAM189A2Q15884 450 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 SLC6A19Q695T7 634 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 APOOLQ6UXV4 268 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 SPERTQ8NA61 448 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 SCGB3A2Q96PL1 93 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 TEAD3Q99594 435 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 EVA1AQ9H8M9 152 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 DZANK1Q9NVP4 752 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 MEMO1Q9Y316 297 aa13.71□□□□□ -0.21
TCOF1-201ENST00000323668 FCMRO60667 390 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 RAB40ALP0C0E4 278 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 PCBP3P57721 371 aaKnown RBP13.71□□□□□ -0.22
TCOF1-201ENST00000323668 TIGD3Q6B0B8 471 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 CCDC71Q8IV32 467 aaPredicted RBP13.71□□□□□ -0.22
TCOF1-201ENST00000323668 GPR32P1Q8NGA4 272 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 OR5J2Q8NH18 312 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 RAB40AQ8WXH6 277 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 NXPE3Q969Y0 559 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 RBP7Q96R05 134 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 MYADMQ96S97 322 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 FBXL3Q9UKT7 428 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 A4GNTQ9UNA3 340 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 CAMK2AQ9UQM7 478 aa13.71□□□□□ -0.22
TCOF1-201ENST00000323668 RLN2P04090 185 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 RIDAP52758 137 aaKnown RBP13.7□□□□□ -0.22
TCOF1-201ENST00000323668 KLHDC7BQ96G42 594 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-201ENST00000323668 EMC7Q9NPA0 242 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 SGK494L7N484 410 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 SLC22A5O76082 557 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 PTPN6P29350 595 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 LHX8Q68G74 356 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 LINC00615Q96LM1 132 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-201ENST00000323668 METTL8Q9H825 291 aaKnown RBP13.7□□□□□ -0.22
TCOF1-201ENST00000323668 GDE1Q9NZC3 331 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 SLC23A2Q9UGH3 650 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 MBD1Q9UIS9 605 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-201ENST00000323668 ZNF281Q9Y2X9 895 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 PRSS38A1L453 326 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 ACOD1A6NK06 481 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 TNFRSF10AO00220 468 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 SLC2A10O95528 541 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 SBK2P0C263 348 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 PNMTP11086 282 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 PVRP15151 417 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 HSD11B1P28845 292 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 SOX18P35713 384 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 FGL1Q08830 312 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 SLC35F3Q8IY50 421 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 ADGRF3Q8IZF5 1079 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 LGALS14Q8TCE9 139 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 CCDC120Q96HB5 630 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 TMEM41AQ96HV5 264 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 MSLNLQ96KJ4 702 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 TREM1Q9NP99 234 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 ATP13A2Q9NQ11 1180 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 NOX1Q9Y5S8 564 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 HOXC11O43248 304 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-201ENST00000323668 RAP2BP61225 183 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 FAM78AQ5JUQ0 283 aa13.7□□□□□ -0.22
TCOF1-201ENST00000323668 ZNF761Q86XN6 746 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-201ENST00000323668 LMF1Q96S06 567 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms