RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FHL5Q5TD97 284 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 C1orf53Q5VUE5 145 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 FCRLBQ6BAA4 426 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 PAQR7Q86WK9 346 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 BEST4Q8NFU0 473 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 NT5CQ8TCD5 201 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 MEPEQ9NQ76 525 aaPredicted RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 PHPT1Q9NRX4 125 aaPredicted RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 SSNA1O43805 119 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 PEX14O75381 377 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 GATBO75879 557 aaKnown RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 PCDH8O95206 1070 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 TGM6O95932 706 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 HPXP02790 462 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 ZNF888P0CJ79 500 aaPredicted RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 GDNFP39905 211 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 MFSD13AQ14CX5 517 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 AANATQ16613 207 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 UBE2NLQ5JXB2 153 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 DCST2Q5T1A1 773 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 FAM69AQ5T7M9 428 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 RTL4Q6ZR62 310 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 ESPNLQ6ZVH7 1005 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 SYS1Q8N2H4 156 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 LCORQ96JN0 433 aaPredicted RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 C19orf53Q9UNZ5 99 aaPredicted RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 MRPS23Q9Y3D9 190 aaKnown RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 INSL6Q9Y581 213 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 TRAV27A0A087WT01 109 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 KHNYNO15037 678 aaKnown RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 KCNJ13O60928 360 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 PPP1R3DO95685 299 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 LAMP2P13473 410 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 ZNF250P15622 560 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 ITGB8P26012 769 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 SSTR2P30874 369 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 GDI2P50395 445 aaKnown RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 RPS11P62280 158 aaKnown RBP eCLIP17.64■□□□□ 0.41
RTN4-201ENST00000317610 SNRPNP63162 240 aaKnown RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 HTRA4P83105 476 aaPredicted RBP17.64■□□□□ 0.41
RTN4-201ENST00000317610 CAMK1Q14012 370 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 USP53Q70EK8 1073 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 NLRC3Q7RTR2 1065 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 SYT9Q86SS6 491 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 RFLNBQ8N5W9 214 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 ZNF527Q8NB42 609 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 CYB561A3Q8NBI2 242 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 NANSQ9NR45 359 aa17.64■□□□□ 0.41
RTN4-201ENST00000317610 A0A1B0GTQ1 180 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 PRAF2O60831 178 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 ITGA10O75578 1167 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 CEACAM5P06731 702 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 CLTBP09497 229 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 RRASP10301 218 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 FGL2Q14314 439 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 GAS6Q14393 721 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 ZNF613Q6PF04 617 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 PRSS45Q7RTY3 260 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 SLITRK4Q8IW52 837 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 SLC43A2Q8N370 569 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 OMA1Q96E52 524 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 PELI1Q96FA3 418 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 CCDC120Q96HB5 630 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 AUNIPQ9H7T9 357 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 PRDM9Q9NQV7 894 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 RPS6KB2Q9UBS0 482 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 ICAM5Q9UMF0 924 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 FKBP7Q9Y680 259 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 SCN3AQ9NY46 2000 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 CIB4A0PJX0 185 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 TUBAL3A6NHL2 446 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 PEX12O00623 359 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 OR7A10O76100 309 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 TFP02787 698 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 SELENOPP49908 381 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 PLAURQ03405 335 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 TP53I3Q53FA7 332 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 UXS1Q8NBZ7 420 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 OR11G2Q8NGC1 345 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 LGALS14Q8TCE9 139 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 ORAI3Q9BRQ5 295 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 KIR3DX1Q9H7L2 352 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 ZDHHC4Q9NPG8 344 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 DUSP22Q9NRW4 184 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 C14orf105Q9NVL8 296 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 SLC17A4Q9Y2C5 497 aa17.63■□□□□ 0.41
RTN4-201ENST00000317610 SMIM10L1P0DMW3 83 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 ACRP10323 421 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 CPMP14384 443 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 LCN1P31025 176 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 CCR9P51686 369 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 VSX2P58304 361 aaPredicted RBP17.62■□□□□ 0.41
RTN4-201ENST00000317610 RPS15AP62244 130 aaKnown RBP17.62■□□□□ 0.41
RTN4-201ENST00000317610 ACTA2P62736 377 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 ACTG2P63267 376 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 FHL1Q13642 323 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 TRMT12Q53H54 448 aaKnown RBP17.62■□□□□ 0.41
RTN4-201ENST00000317610 ARHGAP11AQ6P4F7 1023 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 UNQ9370/PRO34162Q6UXP9 181 aa17.62■□□□□ 0.41
RTN4-201ENST00000317610 DGLUCYQ7Z3D6 616 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms