RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 BCORP1Q8N888 145 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 OR1L3Q8NH93 324 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 SENP5Q96HI0 755 aaPredicted RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 SHDQ96IW2 340 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 KLHDC3Q9BQ90 382 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 OR51V1Q9H2C8 321 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 TMEM27Q9HBJ8 222 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 Q9N2J8 555 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 RPRD1BQ9NQG5 326 aaKnown RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 PRDM9Q9NQV7 894 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 ZNF223Q9UK11 482 aaPredicted RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 CDH10Q9Y6N8 788 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 CACNA1CQ13936 2221 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 MRPL3P09001 348 aaKnown RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 DDOSTP39656 456 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 ACAA2P42765 397 aaKnown RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 DHPSP49366 369 aaPredicted RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 RHAGQ02094 409 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 CRYZQ08257 329 aaKnown RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 TIMM50Q3ZCQ8 353 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 SMUG1Q53HV7 270 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 ZCCHC12Q6PEW1 402 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 KIRREL2Q6UWL6 708 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 SYT14Q8NB59 555 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 OR6C4Q8NGE1 309 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 TNFRSF13CQ96RJ3 184 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 CITED4Q96RK1 184 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 IRF2BPLQ9H1B7 796 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 CHRDQ9H2X0 955 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 ANKRD19PQ9H560 264 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 DIMT1Q9UNQ2 313 aaKnown RBP11.44□□□□□ -0.58
RNF4-201ENST00000314289 SIT1Q9Y3P8 196 aa11.44□□□□□ -0.58
RNF4-201ENST00000314289 K7ESF4 209 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 PRAMEF2O60811 474 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 REM1O75628 298 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 SERPINI2O75830 405 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 LIMS3P0CW19 117 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 LIMS4P0CW20 117 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 IL7P13232 177 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 BMP7P18075 431 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 DRD5P21918 477 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 NOS3P29474 1203 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 RPS7P62081 194 aaKnown RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 GALK2Q01415 458 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 C1DQ13901 141 aaKnown RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 GRM7Q14831 915 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 Q5BKY6 102 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 C22orf42Q6IC83 251 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 PRR23CQ6ZRP0 262 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 C17orf82Q86X59 251 aaPredicted RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 SIRT6Q8N6T7 355 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 PROKR2Q8NFJ6 384 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 BARHL1Q9BZE3 327 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 CBLCQ9ULV8 474 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 MED31Q9Y3C7 131 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 GRIP1Q9Y3R0 1128 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 CPED1A4D0V7 1026 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 ZNF749O43361 778 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 ALX3O95076 343 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 CSTAP01040 98 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 TSPAN19P0C672 248 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 CLEC2LP0C7M8 214 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 TBXA2RP21731 343 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 PSMA1P25786 263 aaKnown RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 ETV6P41212 452 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 RPS25P62851 125 aaKnown RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 LYPD8Q6UX82 237 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 MED25Q71SY5 747 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 TMPRSS9Q7Z410 1059 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 OR51L1Q8NGJ5 315 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 PTPMT1Q8WUK0 201 aaPredicted RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 ASB15Q8WXK1 588 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 C1GALT1C1Q96EU7 318 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 HS6ST2Q96MM7 605 aa11.43□□□□□ -0.58
RNF4-201ENST00000314289 SECISBP2Q96T21 854 aaKnown RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 LMF2Q9BU23 707 aaKnown RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 H2AFY2Q9P0M6 372 aaPredicted RBP11.43□□□□□ -0.58
RNF4-201ENST00000314289 OIP5O43482 229 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 CPNE3O75131 537 aaKnown RBP11.42□□□□□ -0.58
RNF4-201ENST00000314289 PPP1R3DO95685 299 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 GIMD1P0DJR0 217 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 CRYBB2P43320 205 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 SKP1P63208 163 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 ZP2Q05996 745 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 AADACL4Q5VUY2 407 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 OGFOD3Q6PK18 319 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 FAM131AQ6UXB0 335 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 CXXC5Q7LFL8 322 aaKnown RBP11.42□□□□□ -0.58
RNF4-201ENST00000314289 BMP8AQ7Z5Y6 402 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 OR2I1PQ8NGU4 316 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 DCLRE1CQ96SD1 692 aaKnown RBP11.42□□□□□ -0.58
RNF4-201ENST00000314289 V9GYH0 126 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 A0A0B4J2E0 115 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 A0A1B0GX12 115 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 CAV3P56539 151 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 GNG2P59768 71 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 HSD11B2P80365 405 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 TP53BP1Q12888 1972 aaPredicted RBP11.42□□□□□ -0.58
RNF4-201ENST00000314289 CD226Q15762 336 aa11.42□□□□□ -0.58
RNF4-201ENST00000314289 ZNF79Q15937 498 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms