RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CPNE7Q9UBL6 633 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SHPKQ9UHJ6 478 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 PSORS1C1Q9UIG5 152 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 NPIPA5A0A0B4J1W7 369 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 NPIPA7E9PJI5 369 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 KCNK2O95069 426 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 MMP2P08253 660 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 NPIPA8P0DM63 369 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 YIF1BQ5BJH7 314 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SBSNQ6UWP8 590 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 Q6ZPB1 254 aaPredicted RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 NLGN4XQ8N0W4 816 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 ACOT4Q8N9L9 421 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 ARPC5LQ9BPX5 153 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 PAAF1Q9BRP4 392 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 OLAHQ9NV23 265 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF337Q9Y3M9 751 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 NPIPB15A6NHN6 443 aaPredicted RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 B4DXG7 233 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 MPPED1O15442 326 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SDC3O75056 442 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 EFNA3P52797 238 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 TAS2R46P59540 309 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 HHEXQ03014 270 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 TNK1Q13470 666 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 GPR18Q14330 331 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 ARHGAP19Q14CB8 494 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 KIAA0895LQ68EN5 471 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 IDO2Q6ZQW0 420 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SLC46A3Q7Z3Q1 461 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 CNTN4Q8IWV2 1026 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 CHST14Q8NCH0 376 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SGK3Q96BR1 496 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SORBS1Q9BX66 1292 aaKnown RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 CHRDQ9H2X0 955 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 EVA1AQ9H8M9 152 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SLAMF8Q9P0V8 285 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 NFKBIEO00221 500 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SCG5P05408 212 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF888P0CJ79 500 aaPredicted RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SNRPBP14678 240 aaKnown RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 ETV1P50549 477 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 LILRA2Q8N149 483 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 KDM8Q8N371 416 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SLC30A7Q8NEW0 376 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 OR8J2Q8NGG1 315 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 TANKQ92844 425 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 RBPMSQ93062 196 aaKnown RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 SDHAF2Q9NX18 166 aa12.82□□□□□ -0.36
CLCN6-201ENST00000312413 VSX1Q9NZR4 365 aaPredicted RBP12.82□□□□□ -0.36
CLCN6-201ENST00000312413 TMEM269A0A1B0GVZ9 245 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 TNFRSF10AO00220 468 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 SLC16A7O60669 478 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 C5AR1P21730 350 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 RPS18P62269 152 aaKnown RBP12.81□□□□□ -0.36
CLCN6-201ENST00000312413 TSPAN31Q12999 210 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 ACTBL2Q562R1 376 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 C3orf38Q5JPI3 329 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 OR14L1PQ8NHC6 308 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 RNF141Q8WVD5 230 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 RSC1A1Q92681 617 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 EGLN2Q96KS0 407 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 D6RAR5 112 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 HOXA9P31269 272 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 SFTPDP35247 375 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 TRA2BP62995 288 aaKnown RBP12.81□□□□□ -0.36
CLCN6-201ENST00000312413 RNF4P78317 190 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 FCN2Q15485 313 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 FAM122BQ7Z309 247 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 PLXDC1Q8IUK5 500 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 ACVR1CQ8NER5 493 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 MDGA1Q8NFP4 955 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 CENPOQ9BU64 300 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 SLC17A9Q9BYT1 436 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 RARRES3Q9UL19 164 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 MSTNO14793 375 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 UBL3O95164 117 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 PTHP01270 115 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 APEX1P27695 318 aaKnown RBP12.81□□□□□ -0.36
CLCN6-201ENST00000312413 DAPP51397 102 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 RPS25P62851 125 aaKnown RBP12.81□□□□□ -0.36
CLCN6-201ENST00000312413 TAGLNQ01995 201 aaKnown RBP12.81□□□□□ -0.36
CLCN6-201ENST00000312413 MPEG1Q2M385 716 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 DEFB110Q30KQ9 67 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 LEXMQ3ZCV2 418 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 COX15Q7KZN9 410 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 CMIPQ8IY22 773 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 PXT1Q8NFP0 134 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.367e-7■■□□□ 13.5
CLCN6-201ENST00000312413 RTP3Q9BQQ7 232 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 MED17Q9NVC6 651 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 GON4LQ3T8J9 2241 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 MYH8P13535 1937 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 HIDE1A8MVS5 230 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 J3KTA2 159 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLCN6-201ENST00000312413 POLR2IP36954 125 aaKnown RBP12.81□□□□□ -0.36
CLCN6-201ENST00000312413 OR2A12Q8NGT7 310 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 ASB17Q8WXJ9 295 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms