RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TCEAL6Q6IPX3 200 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 C19orf48Q6RUI8 117 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 SLCO6A1Q86UG4 719 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 CROCCP3Q8IVE0 287 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 SLC43A2Q8N370 569 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 BMPERQ8N8U9 685 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 APCDD1LQ8NCL9 501 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 TCEAL3Q969E4 200 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 TP53INP1Q96A56 240 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 SLC26A1Q9H2B4 701 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 MYO15AQ9UKN7 3530 aa19.46■□□□□ 0.71
ATG4D-201ENST00000309469 A0A1W2PQD3 144 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 CCRL2O00421 344 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 GDF9O60383 454 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 PPM1BO75688 479 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 LDOC1O95751 146 aaPredicted RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 PNMTP11086 282 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 MYL12AP19105 171 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 GRK6P43250 576 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ANGPT1Q15389 498 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 DGUOKQ16854 277 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF829Q3KNS6 432 aaPredicted RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 PLBD1Q6P4A8 553 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 MARCH3Q86UD3 253 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 DYNC2LI1Q8TCX1 351 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 SPSB2Q99619 263 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 TAPBPLQ9BX59 468 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 SLC19A3Q9BZV2 496 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 OR51E2Q9H255 320 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 CMC2Q9NRP2 79 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 CHCHD3Q9NX63 227 aaKnown RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 PPIEQ9UNP9 301 aaKnown RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 BAIAP2Q9UQB8 552 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 PCDHGA3Q9Y5H0 932 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 SEC16AO15027 2179 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 FAM183AA6NL82 134 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ELOA3DA6NLF2 546 aaPredicted RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ALG1L2C9J202 215 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 KHNYNO15037 678 aaKnown RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 CPNE3O75131 537 aaKnown RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 SLC6A6P31641 620 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 TGFBR1P36897 503 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 SLC6A8P48029 635 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF117Q03924 483 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 C1DQ13901 141 aaKnown RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ELOA3BQ3SY89 546 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ATG4DQ86TL0 474 aaPredicted RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ATCAYQ86WG3 371 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ELOA3Q8NG57 546 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 OTULINQ96BN8 352 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ZHX1-C8orf76Q96EF9 292 aa19.45■□□□□ 0.7
ATG4D-201ENST00000309469 EXOSC1Q9Y3B2 195 aaKnown RBP19.45■□□□□ 0.7
ATG4D-201ENST00000309469 ZDBF2Q9HCK1 2354 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 IGKV1D-42A0A075B6H8 117 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 SOCS6O14544 535 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 NDUFB5O43674 189 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF883P0CG24 379 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 SSX1Q16384 188 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 PAPD4Q6PIY7 484 aaKnown RBP19.44■□□□□ 0.7
ATG4D-201ENST00000309469 DBX2Q6ZNG2 339 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 SHFQ7M4L6 423 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 GID4Q8IVV7 300 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 BORCS5Q969J3 196 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 SH3YL1Q96HL8 342 aaPredicted RBP19.44■□□□□ 0.7
ATG4D-201ENST00000309469 WDR77Q9BQA1 342 aaPredicted RBP19.44■□□□□ 0.7
ATG4D-201ENST00000309469 CRB3Q9BUF7 120 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 TBL1XR1Q9BZK7 514 aa19.44■□□□□ 0.7
ATG4D-201ENST00000309469 AKIRIN1Q9H9L7 192 aaPredicted RBP19.44■□□□□ 0.7
ATG4D-201ENST00000309469 EXOGQ9Y2C4 368 aaKnown RBP19.44■□□□□ 0.7
ATG4D-201ENST00000309469 HTR3EA5X5Y0 456 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 HCRTR2O43614 444 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 EIF4E2O60573 245 aaKnown RBP19.43■□□□□ 0.7
ATG4D-201ENST00000309469 PPP1R3DO95685 299 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 GP1BAP07359 652 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 MST1P26927 711 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 UGT2B10P36537 528 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 SERPINB10P48595 397 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 SLC9A3P48764 834 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 BMXP51813 675 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 MRPL14Q6P1L8 145 aaKnown RBP19.43■□□□□ 0.7
ATG4D-201ENST00000309469 LRRC17Q8N6Y2 441 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF563Q8TA94 476 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 ZBTB20Q9HC78 741 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-201ENST00000309469 RXFP3Q9NSD7 469 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 PCDHGB2Q9Y5G2 931 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 OR6C70A6NIJ9 312 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 LRRN3E7EW58 273 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 NADKO95544 446 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-201ENST00000309469 PEPDP12955 493 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 CCL4P13236 92 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF28P17035 718 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 ENDOUP21128 410 aaKnown RBP19.43■□□□□ 0.7
ATG4D-201ENST00000309469 ACP1P24666 158 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 SLC1A3P43003 542 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 LIMK1P53667 647 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 NRG3P56975 720 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 MC2RQ01718 297 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 MLLT11Q13015 90 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF362Q5T0B9 420 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-201ENST00000309469 NIPAL3Q6P499 406 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms