RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PCDHGB7Q9Y5F8 929 aa11.77□□□□□ -0.52
RETREG3-201ENST00000309428 A0A087WUU8 490 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 ELOA3DA6NLF2 546 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 LEUTXA8MZ59 168 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 C4orf51C9J302 202 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 CREBL2O60519 120 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 UBXN7O94888 489 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 RAF1P04049 648 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 HIST1H1TP22492 207 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 AP3S2P59780 193 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 SQSTM1Q13501 440 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 ELOA3BQ3SY89 546 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 AMZ1Q400G9 498 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 HAGHLQ6PII5 290 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 TMEM64Q6YI46 380 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 SHISA6Q6ZSJ9 500 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 NDUFAF7Q7L592 441 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 OAFQ86UD1 273 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 ELOA3Q8NG57 546 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 OR52E2Q8NGJ4 325 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 ACOT12Q8WYK0 555 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 RERGQ96A58 199 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 GSX2Q9BZM3 304 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 SLC27A6Q9Y2P4 619 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 CDH10Q9Y6N8 788 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 FRYLO94915 3013 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 SVILO95425 2214 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 CARNS1A5YM72 827 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF705EA8MWA4 302 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 LANCL1O43813 399 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 PPP1R3DO95685 299 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 OPRD1P41143 372 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 SHHQ15465 462 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 SMAD2Q15796 467 aaKnown RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 PYHIN1Q6K0P9 492 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 TEX261Q6UWH6 196 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 RANBP3LQ86VV4 465 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 OR5M3Q8NGP4 307 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 VOPP1Q96AW1 172 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 B3GNT4Q9C0J1 378 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 BABAM2Q9NXR7 383 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 ASIC5Q9NY37 505 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 AKAP7Q9P0M2 348 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 AP1M2Q9Y6Q5 423 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 U3KQ87 197 aa11.77□□□□□ -0.53
RETREG3-201ENST00000309428 FNDC1Q4ZHG4 1894 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-201ENST00000309428 CENPVL1A0A0U1RR11 272 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 C5orf51A6NDU8 294 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 PEX12O00623 359 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 GOSR2O14653 212 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 VEGFDO43915 354 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 ARL6IP5O75915 188 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 GTF2F2P13984 249 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 GABRB1P18505 474 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 ANXA7P20073 488 aaKnown RBP11.76□□□□□ -0.53
RETREG3-201ENST00000309428 DDX6P26196 483 aaKnown RBP eCLIP11.76□□□□□ -0.533e-7■■■■■ 29
RETREG3-201ENST00000309428 BMP8BP34820 402 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 GABRA3P34903 492 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 FOXL2P58012 376 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 TAGLNQ01995 201 aaKnown RBP11.76□□□□□ -0.53
RETREG3-201ENST00000309428 SFXN4Q6P4A7 337 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 BMP8AQ7Z5Y6 402 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 RDH10Q8IZV5 341 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 SDR9C7Q8NEX9 313 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 OR2A1Q8NGT9 310 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 GAL3ST4Q96RP7 486 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 PDCD1LG2Q9BQ51 273 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 AUNIPQ9H7T9 357 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 WDFY4Q6ZS81 3184 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 CDC14CA4D256 554 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 LRIT2A6NDA9 550 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 KHNYNO15037 678 aaKnown RBP11.76□□□□□ -0.53
RETREG3-201ENST00000309428 HLA-DMAP28067 261 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 ACADLP28330 430 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 GDNFP39905 211 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 DLX2Q07687 328 aaPredicted RBP11.76□□□□□ -0.53
RETREG3-201ENST00000309428 PDZD9Q8IXQ8 264 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 OR1E3Q8WZA6 343 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 GHSRQ92847 366 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 SRA1Q9HD15 236 aaKnown RBP11.76□□□□□ -0.53
RETREG3-201ENST00000309428 APOBEC3BQ9UH17 382 aaKnown RBP11.76□□□□□ -0.53
RETREG3-201ENST00000309428 TRIM64BA6NI03 449 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 AGPAT2O15120 278 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 SEMA7AO75326 666 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF3P17036 446 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 NPR2P20594 1047 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 SLC25A35Q3KQZ1 300 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 ITPRIPL2Q3MIP1 535 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 METRNLQ641Q3 311 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 FCRLAQ7L513 359 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 PAQR7Q86WK9 346 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 ARL14Q8N4G2 192 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 FCAMRQ8WWV6 532 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 S100A16Q96FQ6 103 aaKnown RBP11.76□□□□□ -0.53
RETREG3-201ENST00000309428 LRIG1Q96JA1 1093 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 MSLNLQ96KJ4 702 aa11.76□□□□□ -0.53
RETREG3-201ENST00000309428 OR7D2Q96RA2 312 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms