RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PTGES3Q15185 160 aaKnown RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 MAPK11Q15759 364 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CLPPQ16740 277 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 EXOC3L2Q2M3D2 409 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 C12orf73Q69YU5 71 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 HIST2H2AA3Q6FI13 130 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 THOC7Q6I9Y2 204 aaKnown RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 FAM71E1Q6IPT2 247 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF770Q6IQ21 691 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 REEP3Q6NUK4 255 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 MED27Q6P2C8 311 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM71Q6P5X7 295 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 XKRXQ6PP77 449 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 METAP1DQ6UB28 335 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 HSDL2Q6YN16 418 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 Q6ZVL8 140 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 PTCHD4Q6ZW05 846 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 TECPR1Q7Z6L1 1165 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 RAB43Q86YS6 212 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 LIX1LQ8IVB5 337 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SYTL1Q8IYJ3 562 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 NRSN1Q8IZ57 195 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CLECL1Q8IZS7 167 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CYP4Z2PQ8N1L4 340 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 GDPD1Q8N9F7 314 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 B3GNT7Q8NFL0 401 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 NLGN4YQ8NFZ3 816 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 OR4A15Q8NGL6 344 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 OR8J1Q8NGP2 316 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 OR10Q1Q8NGQ4 319 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 OR6F1Q8NGZ6 308 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ELMO1Q92556 727 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 NR4A3Q92570 626 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 HTRA1Q92743 480 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SCAMP4Q969E2 229 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 TRIM63Q969Q1 353 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 NUS1Q96E22 293 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM80Q96HE8 168 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CEP19Q96LK0 163 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 FOPNLQ96NB1 174 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SDHCQ99643 169 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 COQ7Q99807 217 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 RHNO1Q9BSD3 238 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CCM2Q9BSQ5 444 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ZSCAN5AQ9BUG6 496 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 MND1Q9BWT6 205 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 UCK2Q9BZX2 261 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 PITHD1Q9GZP4 211 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ABCG8Q9H221 673 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 OR51E2Q9H255 320 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 FAM83DQ9H4H8 585 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SLA2Q9H6Q3 261 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 AKIRIN1Q9H9L7 192 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 NEK6Q9HC98 313 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SMURF1Q9HCE7 757 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 A4GALTQ9NPC4 353 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SACM1LQ9NTJ5 587 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 MRPS18AQ9NVS2 196 aaKnown RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 MS4A12Q9NXJ0 267 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 QPCTLQ9NXS2 382 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 GPR83Q9NYM4 423 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 TAS2R9Q9NYW1 312 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SH3BP4Q9P0V3 963 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SPATA7Q9P0W8 599 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 STOX2Q9P2F5 926 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 AASSQ9UDR5 926 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CD84Q9UIB8 345 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 PHF11Q9UIL8 331 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF221Q9UK13 617 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 POU2F3Q9UKI9 436 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 TMPRSS11EQ9UL52 423 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 TMCC3Q9ULS5 477 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 SLC17A4Q9Y2C5 497 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 LSM2Q9Y333 95 aaKnown RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 RPL36Q9Y3U8 105 aaKnown RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 PRKAB1Q9Y478 270 aa4.52□□□□□ -1.69
CKS1B-201ENST00000308987 CFAP20Q9Y6A4 193 aaKnown RBP4.52□□□□□ -1.69
CKS1B-201ENST00000308987 GTF3C1Q12789 2109 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SPG11Q96JI7 2443 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 LOC100506127A0A0U1RQW1 187 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 GNG14A0A1W2PPG7 69 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 TRBC2A0A5B9 178 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 UBE2QL1A1L167 161 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 HYKKA2RU49 373 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SNTNA6NMZ2 147 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 CENPXA8MT69 81 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ARHGEF33A8MVX0 844 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 FAM25AB3EWG3 89 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 FAM25CB3EWG5 89 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 FAM25GB3EWG6 89 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 E7EQ34 232 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF561-AS1K7EIQ3 104 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 PSMD11O00231 422 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 IDH3BO43837 385 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SEMA3DO95025 777 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 MPIG6BO95866 241 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 C1GALT1C1LP0DN25 315 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 ETFAP13804 333 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 SPNP16150 400 aa4.51□□□□□ -1.69
CKS1B-201ENST00000308987 KELP23276 732 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms