RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PAPD4Q6PIY7 484 aaKnown RBP10.88□□□□□ -0.67
TRIM40-205ENST00000307859 CDK20Q8IZL9 346 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 GALNT15Q8N3T1 639 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 GATSQ8NAP1 163 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 OR2T33Q8NG76 320 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 NUBPLQ8TB37 319 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 FANK1Q8TC84 345 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 PHOSPHO1Q8TCT1 267 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 VMP1Q96GC9 406 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF582Q96NG8 517 aaPredicted RBP10.88□□□□□ -0.67
TRIM40-205ENST00000307859 BCL7BQ9BQE9 202 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 CRB3Q9BUF7 120 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 TEX12Q9BXU0 123 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 OR52D1Q9H346 318 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 GPN2Q9H9Y4 310 aaPredicted RBP10.88□□□□□ -0.67
TRIM40-205ENST00000307859 LIN28AQ9H9Z2 209 aaKnown RBP10.88□□□□□ -0.67
TRIM40-205ENST00000307859 RPS6KB2Q9UBS0 482 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 NXT1Q9UKK6 140 aaKnown RBP10.88□□□□□ -0.67
TRIM40-205ENST00000307859 ICAM5Q9UMF0 924 aa10.88□□□□□ -0.67
TRIM40-205ENST00000307859 CYSRT1A8MQ03 144 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 KDM4EB2RXH2 506 aaPredicted RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 B4E171 279 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ALG1L2C9J202 215 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 KPNA4O00629 521 aaPredicted RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 MAN1A2O60476 641 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 RCBTB2O95199 551 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 HMGN1P05114 100 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ADRA2AP08913 450 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ADORA3P0DMS8 318 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 PSMB9P28065 219 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 GRK5P34947 590 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 TSPAN7P41732 249 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ST13P50502 369 aaKnown RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 COPZ1P61923 177 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 CLEC12AQ5QGZ9 265 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 RNLSQ5VYX0 342 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 DESI1Q6ICB0 168 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 CPEB2Q7Z5Q1 589 aaKnown RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 CYP4Z2PQ8N1L4 340 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 SLC43A2Q8N370 569 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 DEFB124Q8NES8 71 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 OR13C2Q8NGS9 318 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 C3orf49Q96BT1 292 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 CRELD1Q96HD1 420 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 LRR1Q96L50 414 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 SAMD8Q96LT4 415 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 MESP1Q9BRJ9 268 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 LAT2Q9GZY6 243 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 UBQLN3Q9H347 655 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 HHATLQ9HCP6 504 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 MRPS18AQ9NVS2 196 aaKnown RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 WARS2Q9UGM6 360 aaKnown RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 SIGLEC7Q9Y286 467 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 EML6Q6ZMW3 1958 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 OR6C70A6NIJ9 312 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ENO4A6NNW6 628 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 EFCAB9A8MZ26 197 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 BHLHE40O14503 412 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 PRODHO43272 600 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 HCN1O60741 890 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 PTP4A3O75365 173 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 GABARAPO95166 117 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 CD59P13987 128 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 FUT1P19526 365 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ENDOUP21128 410 aaKnown RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 TGFBR2P37173 567 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 PEX19P40855 299 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 SLC6A8P48029 635 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 NCF4Q15080 339 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 TMEM44Q2T9K0 475 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 WBP2NLQ6ICG8 309 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 CBLN3Q6UW01 205 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 FAM198BQ6UWH4 519 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 HSDL2Q6YN16 418 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF517Q6ZMY9 492 aaPredicted RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF367Q7RTV3 350 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 BCDIN3DQ7Z5W3 292 aaKnown RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 LSRQ86X29 649 aaPredicted RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 LNX2Q8N448 690 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 OR52L1Q8NGH7 329 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 OR8K3Q8NH51 312 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 ZFAND2BQ8WV99 257 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 LPAR4Q99677 370 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 RTN4RQ9BZR6 473 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 SLC19A3Q9BZV2 496 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 AKIRIN1Q9H9L7 192 aaPredicted RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 C19orf25Q9UFG5 118 aaPredicted RBP10.87□□□□□ -0.67
TRIM40-205ENST00000307859 CARD8Q9Y2G2 431 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 IGSF10Q6WRI0 2623 aa10.87□□□□□ -0.67
TRIM40-205ENST00000307859 DSPP15924 2871 aaKnown RBP10.86□□□□□ -0.67
TRIM40-205ENST00000307859 LOC102723996A0A087X1L8 192 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 HTR3EA5X5Y0 456 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 SNTNA6NMZ2 147 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 M0R082 166 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 GTPBP1O00178 669 aaKnown RBP10.86□□□□□ -0.67
TRIM40-205ENST00000307859 FADS1O60427 444 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 EIF4E2O60573 245 aaKnown RBP10.86□□□□□ -0.67
TRIM40-205ENST00000307859 PTHP01270 115 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 IGF2P01344 180 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms