RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CNKSR3Q6P9H4 555 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 HSD11B1LQ7Z5J1 315 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ZNF610Q8N9Z0 462 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 OR52H1Q8NGJ2 320 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ABRACLQ9P1F3 81 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 SHC1P29353 583 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 NUDT1P36639 197 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 EPHA4P54764 986 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ZNF689Q96CS4 500 aaPredicted RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 TRMT2BQ96GJ1 504 aaKnown RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 LRFN5Q96NI6 719 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 MYNNQ9NPC7 610 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 LMO7Q8WWI1 1683 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 TRBV11-1A0A0K0K1C0 115 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 FZD7O75084 574 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 CASP3P42574 277 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 CAMK2DQ13557 499 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 TRAM1Q15629 374 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 OR2B11Q5JQS5 317 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 MISPQ8IVT2 679 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 ZNF334Q9HCZ1 680 aaPredicted RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 HPRP00739 348 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 GNB1P62873 340 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 KCNC3Q14003 757 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 BHLHE23Q8NDY6 225 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 FNDC9Q8TBE3 224 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 HCAR1Q9BXC0 346 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 NXF2Q9GZY0 626 aaKnown RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 POFUT1Q9H488 388 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP38-201ENST00000307017 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 A0A1W2PPV4 95 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 RPL26P61254 145 aaKnown RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 SIX1Q15475 284 aaPredicted RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 EMC10Q5UCC4 262 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 SULF2Q8IWU5 870 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 ALDH16A1Q8IZ83 802 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 MTMR14Q8NCE2 650 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 LRRC46Q96FV0 321 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 REEP6Q96HR9 211 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 NAA11Q9BSU3 229 aaPredicted RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 ANKMY1Q9P2S6 941 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 PRODH2Q9UF12 536 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 INSL6Q9Y581 213 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 PIRO00625 290 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 FCGR2AP12318 317 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 GBX1Q14549 363 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 YOD1Q5VVQ6 348 aaPredicted RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 SBSNQ6UWP8 590 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 ZDHHC14Q8IZN3 488 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 WDSUB1Q8N9V3 476 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 TMEM40Q8WWA1 233 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 FABP7O15540 132 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 SNNO75324 88 aaPredicted RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 PIM1P11309 404 aaPredicted RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 CLDN8P56748 225 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 MLF2Q15773 248 aaPredicted RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 CDKN3Q16667 212 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 PITHD1Q9GZP4 211 aaPredicted RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 TGM5O43548 720 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 TPT1P13693 172 aaKnown RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 SPINT3P49223 89 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 KIAA1024LP59773 190 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 RPS15AP62244 130 aaKnown RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 DEFA6Q01524 100 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 ALKBH6Q3KRA9 238 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 IL34Q6ZMJ4 242 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 RBM12BQ8IXT5 1001 aaKnown RBP11.84□□□□□ -0.51
USP38-201ENST00000307017 LMO3Q8TAP4 145 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 TMEM239Q8WW34 195 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 MIB2Q96AX9 1013 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 XYLT2Q9H1B5 865 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
USP38-201ENST00000307017 POU2F2P09086 479 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 ZNF28P17035 718 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 GDF1P27539 372 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 P2RY2P41231 377 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 COX20Q5RI15 118 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 TAAR8Q969N4 342 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 OR7D2Q96RA2 312 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 ELOVL3Q9HB03 270 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 HRASLSQ9HDD0 168 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 RPS16P62249 146 aaKnown RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 CST6Q15828 149 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 ZNF691Q5VV52 312 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 PAPD4Q6PIY7 484 aaKnown RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 LRRTM3Q86VH5 581 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 DCP2Q8IU60 420 aaKnown RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 OR5AS1Q8N127 324 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 ADAMTS19Q8TE59 1207 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 FOXRED1Q96CU9 486 aaPredicted RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 CNTNAP3Q9BZ76 1288 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 MEX3AA1L020 520 aaKnown RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 GLTPD2A6NH11 291 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 MAGEB4O15481 346 aaPredicted RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 SULT1C4O75897 302 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms