RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ABHD12BQ7Z5M8 362 aaPredicted RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 LRRC56Q8IYG6 542 aaPredicted RBP14.87□□□□□ -0.03
USP42-201ENST00000306177 RCBTB1Q8NDN9 531 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 NEURL3Q96EH8 262 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 APMAPQ9HDC9 416 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 MAN2C1Q9NTJ4 1040 aa14.87□□□□□ -0.03
USP42-201ENST00000306177 STRCQ7RTU9 1775 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 RAC2P15153 192 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 ARNTP27540 789 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 GPR18Q14330 331 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 SMN1Q16637 294 aaKnown RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 ARSJQ5FYB0 599 aaPredicted RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 TMEM240Q5SV17 173 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 FAM69AQ5T7M9 428 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 TMEM53Q6P2H8 277 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 CFAP77Q6ZQR2 320 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 TMEM102Q8N9M5 508 aaPredicted RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 OR13C2Q8NGS9 318 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 ASB17Q8WXJ9 295 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 LINC01599Q8WXQ3 324 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 FOXRED1Q96CU9 486 aaPredicted RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 PPIL3Q9H2H8 161 aaKnown RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 A0A0G2JMP0 313 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 FUOMA2VDF0 154 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 HMX3A6NHT5 357 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 IL1AP01583 271 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 OPRD1P41143 372 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 TSFMP43897 325 aaKnown RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 POU3F1Q03052 451 aaPredicted RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 ZNF77Q15935 545 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 C18orf63Q68DL7 685 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 PTRH1Q86Y79 214 aaKnown RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 DNAAF1Q8NEP3 725 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 OR4M2Q8NGB6 313 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 PRAF2O60831 178 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 NPPBP16860 134 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 FAM111BQ6SJ93 734 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 KCTD20Q7Z5Y7 419 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 CCDC28AQ8IWP9 274 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 SNAPC3Q92966 411 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 ITPKCQ96DU7 683 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 A4GALTQ9NPC4 353 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 KLHL13Q9P2N7 655 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 SLC22A7Q9Y694 548 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 LOC102725191A0A1B0GVB3 256 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 CSNK1EP49674 416 aaKnown RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 HAGHLQ6PII5 290 aaPredicted RBP14.86□□□□□ -0.03
USP42-201ENST00000306177 SLC35F3Q8IY50 421 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 EID2Q8N6I1 236 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 CHTF18Q8WVB6 975 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 NXPE3Q969Y0 559 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 SLC6A20Q9NP91 592 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 PLEKHJ1Q9NW61 149 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 ASIC5Q9NY37 505 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 ADAM18Q9Y3Q7 739 aa14.86□□□□□ -0.03
USP42-201ENST00000306177 ARAP2Q8WZ64 1704 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 SMCO3A2RU48 225 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 ZNF736B4DX44 427 aaPredicted RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 CNOT4O95628 575 aaKnown RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 AKAIN1P0CW23 69 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 CYCSP99999 105 aaKnown RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 OR5M10Q6IEU7 315 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 TMEM207Q6UWW9 146 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 LILRA3Q8N6C8 439 aaPredicted RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 AGBL5Q8NDL9 886 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 ZNF578Q96N58 590 aaPredicted RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 AMDHD1Q96NU7 426 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 ABRACLQ9P1F3 81 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 TBX21Q9UL17 535 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 RASD1Q9Y272 281 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 ZDHHC11BP0C7U3 371 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 TAS2R31P59538 309 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 CSNK1G2P78368 415 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 SQSTM1Q13501 440 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 CNN3Q15417 329 aaKnown RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 Q6ZPB1 254 aaPredicted RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 DNAJC22Q8N4W6 341 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 BCL7CQ8WUZ0 217 aaPredicted RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 QRSL1Q9H0R6 528 aaKnown RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 A6NL46 340 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 YY2O15391 372 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 EIF2DP41214 584 aaKnown RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 EPHA4P54764 986 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 AFMIDQ63HM1 303 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 MBOAT2Q6ZWT7 520 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 MMP21Q8N119 569 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 OR2T35Q8NGX2 323 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 CCNL2Q96S94 520 aaPredicted RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 C7orf50Q9BRJ6 194 aaKnown RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 SEMA6CQ9H3T2 930 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 GLIPR2Q9H4G4 154 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 GMPR2Q9P2T1 348 aaKnown RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 PAPPAQ13219 1627 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 NUMA1Q14980 2115 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 SERINC4A6NH21 518 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 SSTR4P31391 388 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 P2RY14Q15391 338 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 VASNQ6EMK4 673 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 RPL22L1Q6P5R6 122 aaKnown RBP14.85□□□□□ -0.03
USP42-201ENST00000306177 LILRA2Q8N149 483 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms