RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PRKAR1BP31321 381 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 MAP4K2Q12851 820 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 ARFRP1Q13795 201 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 MICAQ29983 383 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 MRPL21Q7Z2W9 205 aaKnown RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 P2RY8Q86VZ1 359 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 CYB561A3Q8NBI2 242 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 OR5W2Q8NH69 310 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 KLHL9Q9P2J3 617 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 SLC6A5Q9Y345 797 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 MYO16Q9Y6X6 1858 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 EP400Q96L91 3159 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 MYOFQ9NZM1 2061 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 CACNA1GO43497 2377 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 F5H5K5 113 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 HYAL3O43820 417 aaPredicted RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 OSMP13725 252 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 CSRP1P21291 193 aaKnown RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 CHRNB4P30926 498 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 EVI2BP34910 448 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 GK3PQ14409 553 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 MLC1Q15049 377 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 CBLL1Q75N03 491 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 OR9Q2Q8NGE9 314 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 OR51L1Q8NGJ5 315 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 BRIX1Q8TDN6 353 aaKnown RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 TTC9Q92623 222 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF566Q969W8 418 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 TRIB1Q96RU8 372 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 HMG20AQ9NP66 347 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 A4GALTQ9NPC4 353 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 PAQR5Q9NXK6 330 aaPredicted RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 MAGED1Q9Y5V3 778 aaPredicted RBP8.55□□□□□ -1.04
PTPRE-202ENST00000306042 LOC102725191A0A1B0GVB3 256 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 CLUP10909 449 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 CEACAM1P13688 526 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 ZBED5Q49AG3 693 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 SLC16A14Q7RTX9 510 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 GPR155Q7Z3F1 870 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 OR51B6Q9H340 312 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 PRDM7Q9NQW5 492 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 PPT2Q9UMR5 302 aa8.55□□□□□ -1.04
PTPRE-202ENST00000306042 TRAV27A0A087WT01 109 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 A0A1B0GWA3 101 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 FRG2CA6NGY1 282 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 FAM171A2A8MVW0 826 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF587BE7ETH6 402 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 PRODHO43272 600 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 APOL3O95236 402 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 FAUP35544 74 aaKnown RBP8.54□□□□□ -1.04
PTPRE-202ENST00000306042 APOBEC1P41238 236 aaKnown RBP8.54□□□□□ -1.04
PTPRE-202ENST00000306042 COX20Q5RI15 118 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 PLCZ1Q86YW0 608 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 LILRA2Q8N149 483 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 OR5M1Q8NGP8 315 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 FBXO27Q8NI29 283 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 CPT1CQ8TCG5 803 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 GATAD2BQ8WXI9 593 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 VWCEQ96DN2 955 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 SDF2Q99470 211 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 FAM173AQ9BQD7 235 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 HCAR1Q9BXC0 346 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 IFT46Q9NQC8 304 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 ABCA7Q8IZY2 2146 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 PRKNO60260 465 aaPredicted RBP8.54□□□□□ -1.04
PTPRE-202ENST00000306042 SLC16A7O60669 478 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 MTRF1O75570 445 aaKnown RBP8.54□□□□□ -1.04
PTPRE-202ENST00000306042 TRMUO75648 421 aaKnown RBP8.54□□□□□ -1.04
PTPRE-202ENST00000306042 KCNK2O95069 426 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 F13BP05160 661 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 GADD45AP24522 165 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 SDC2P34741 201 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 APOFQ13790 326 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 MAPK11Q15759 364 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 CAMKMTQ7Z624 323 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 ANKRD37Q7Z713 158 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF611Q8N823 705 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 TMEM203Q969S6 136 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 APH1AQ96BI3 265 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 NUDT9Q9BW91 350 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 GORASP2Q9H8Y8 452 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 RLIMQ9NVW2 624 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 TAS2R7Q9NYW3 318 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 hCG_2014768A0A024R1R8 64 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 A0A0A6YYD5 115 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 SYT5O00445 386 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 ICOSLGO75144 302 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 CBR3O75828 277 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 NADKO95544 446 aaPredicted RBP8.54□□□□□ -1.04
PTPRE-202ENST00000306042 HLA-DPB1P04440 258 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF883P0CG24 379 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 SOX2P48431 317 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 ACTA2P62736 377 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 ACTG2P63267 376 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 MC2RQ01718 297 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 BDH1Q02338 343 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 SFTPA2Q8IWL1 248 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 PM20D2Q8IYS1 436 aa8.54□□□□□ -1.04
PTPRE-202ENST00000306042 DNAJC22Q8N4W6 341 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms