RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 SAP25Q8TEE9 199 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 TP53INP1Q96A56 240 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 TMED9Q9BVK6 235 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 PRRG3Q9BZD7 231 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 ERVMER34-1Q9H9K5 563 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 HMG20AQ9NP66 347 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 PILRBQ9UKJ0 227 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 CAB39Q9Y376 341 aaPredicted RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 BLACEA4D250 179 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 C2orf72A6NCS6 295 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 MCIDASD6RGH6 385 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 DVL2O14641 736 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 RCBTB2O95199 551 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 HTR1FP30939 366 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 MLLT11Q13015 90 aaPredicted RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 TOMM34Q15785 309 aaPredicted RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 PLK5Q496M5 336 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 NXNL2Q5VZ03 156 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 OR5M10Q6IEU7 315 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 PWWP2BQ6NUJ5 590 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 ULK3Q6PHR2 472 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 ZNF550Q7Z398 422 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 CENPSQ8N2Z9 138 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 C10orf53Q8N6V4 93 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 LSMEM1Q8N8F7 131 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 PSD4Q8NDX1 1056 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 SPRYD4Q8WW59 207 aaPredicted RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 ADIPOR1Q96A54 375 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 C3orf49Q96BT1 292 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 DTNBP1Q96EV8 351 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 LCORQ96JN0 433 aaPredicted RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 ERMAPQ96PL5 475 aaPredicted RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 CHRNA10Q9GZZ6 450 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 CCDC86Q9H6F5 360 aaKnown RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 FGF20Q9NP95 211 aaPredicted RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 KLHL1Q9NR64 748 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 C14orf105Q9NVL8 296 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 TNFRSF10DQ9UBN6 386 aa10.44□□□□□ -0.74
SCG2-201ENST00000305409 TP53BP1Q12888 1972 aaPredicted RBP10.44□□□□□ -0.74
SCG2-201ENST00000305409 BDP1A6H8Y1 2624 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 TCRBV16S1A1N1A0A5B0 115 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 SLC35F4A4IF30 521 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 SNTNA6NMZ2 147 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 C12orf71A8MTZ7 269 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 SCDO00767 359 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 POLR1CO15160 346 aaPredicted RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 PFDN1O60925 122 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 CELP19835 753 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 MST1P26927 711 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 PPICP45877 212 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 TUBA1BP68363 451 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 DNASE1L3Q13609 305 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 NIPAL3Q6P499 406 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 TMEM71Q6P5X7 295 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 WDR74Q6RFH5 385 aaPredicted RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 QSOX2Q6ZRP7 698 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 TUBA1AQ71U36 451 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 COX15Q7KZN9 410 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 KLBQ86Z14 1044 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 LNX2Q8N448 690 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 OR10H4Q8NGA5 316 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 OR52E2Q8NGJ4 325 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 OR4C6Q8NH72 309 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 STT3BQ8TCJ2 826 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 RFKQ969G6 155 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 DACH2Q96NX9 599 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 OR1F2PQ96R84 312 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 SMAD5Q99717 465 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 HDHD5Q9BXW7 423 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 BARHL1Q9BZE3 327 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 ZNF768Q9H5H4 540 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 UBQLN4Q9NRR5 601 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 NDUFB11Q9NX14 153 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 MMACHCQ9Y4U1 282 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 IER3IP1Q9Y5U9 82 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 CNTRLQ7Z7A1 2325 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 ADAMTS9Q9P2N4 1935 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 PCNX3Q9H6A9 2034 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 A0A1B0GTQ1 180 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 FAM171A2A8MVW0 826 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 PRR23D1E9PI22 279 aaPredicted RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 BLOC1S5-TXNDC5H3BN57 136 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 DYRK3O43781 588 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 CDRT1O95170 752 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 IFI6P09912 130 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 PRR23D2P0DMB1 279 aaPredicted RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 UBL4AP11441 157 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 HIST1H1CP16403 213 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 ITPKBP27987 946 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 GTF2E2P29084 291 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 RPL4P36578 427 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 EBPQ15125 230 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 NR0B2Q15466 257 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 ELAVL1Q15717 326 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.43□□□□□ -0.74
SCG2-201ENST00000305409 CRTC2Q53ET0 693 aaPredicted RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 PRPF38BQ5VTL8 546 aaKnown RBP10.43□□□□□ -0.74
SCG2-201ENST00000305409 HLA-DQA1Q5Y7H0 255 aa10.43□□□□□ -0.74
SCG2-201ENST00000305409 LCN10Q6JVE6 187 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms