RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 COX20Q5RI15 118 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 RIMKLAQ8IXN7 391 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 ZNF679Q8IYX0 411 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 OR2T27Q8NH04 317 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 LGALS14Q8TCE9 139 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 FOXJ1Q92949 421 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 ZIC5Q96T25 663 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 NAA11Q9BSU3 229 aaPredicted RBP12.01□□□□□ -0.49
COL3A1-201ENST00000304636 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
COL3A1-201ENST00000304636 GABARAPL3Q9BY60 117 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 C11orf49Q9H6J7 331 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 GABRQQ9UN88 632 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 ATG4BQ9Y4P1 393 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 CORINQ9Y5Q5 1042 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 RFXAPO00287 272 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 TGM5O43548 720 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 IFNA4P05014 189 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 TIMP2P16035 220 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 KCNJ5P48544 419 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 SERTAD2Q14140 314 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 NEURL3Q96EH8 262 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 MICU1Q9BPX6 476 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 CDCA4Q9BXL8 241 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 HRH4Q9H3N8 390 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 DOT1LQ8TEK3 1739 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 SDC3O75056 442 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 KLF8O95600 359 aaPredicted RBP12.01□□□□□ -0.49
COL3A1-201ENST00000304636 IFNGR1P15260 489 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 RAB6AP20340 208 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 DAP3P51398 398 aaKnown RBP12.01□□□□□ -0.49
COL3A1-201ENST00000304636 GAREM2Q75VX8 874 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 CD163Q86VB7 1156 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 OR5D14Q8NGL3 314 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 GLYATL2Q8WU03 294 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 YIPF6Q96EC8 236 aa12.01□□□□□ -0.49
COL3A1-201ENST00000304636 FAM221BA6H8Z2 402 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 RDH16O75452 317 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 SLC10A3P09131 477 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 CHRNEQ04844 493 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 TIGD3Q6B0B8 471 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 ANKRD12Q6UB98 2062 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 SLCO4C1Q6ZQN7 724 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 TTLL10Q6ZVT0 673 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 SLC51BQ86UW2 128 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 PCNPQ8WW12 178 aaKnown RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 FYTTD1Q96QD9 318 aaKnown RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 ST6GALNAC5Q9BVH7 336 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 ALOXE3Q9BYJ1 711 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 C20orf85Q9H1P6 137 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 B3GALT1Q9Y5Z6 326 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 LATO43561 262 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 FADS1O60427 444 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 IMPA1P29218 277 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 VEGFCP49767 419 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 C18orf63Q68DL7 685 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 UEVLDQ8IX04 471 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 SUMF2Q8NBJ7 301 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 PXT1Q8NFP0 134 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 ASB17Q8WXJ9 295 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 ZNF175Q9Y473 711 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 ENTPD2Q9Y5L3 495 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 hCG_1807616A0A1W2PRN6 198 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 SERPINA5P05154 406 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 SNRNP70P08621 437 aaKnown RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 THBS2P35442 1172 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 RACK1P63244 317 aaKnown RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 PLGLB1Q02325 96 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 DUSP7Q16829 419 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 TOMM40LQ969M1 308 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 TSACCQ96A04 125 aaPredicted RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 PKMYT1Q99640 499 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 ANKRD19PQ9H560 264 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 FBXL2Q9UKC9 423 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 TMEM129A0AVI4 362 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 TSPAN11A1L157 253 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 GGT3PA6NGU5 568 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 HHLA1C9JL84 531 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 SYT5O00445 386 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 IDH3GP51553 393 aaPredicted RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 CAMK2DQ13557 499 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 UBXN2BQ14CS0 331 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 BEX5Q5H9J7 111 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 GPR139Q6DWJ6 353 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 B3GLCTQ6Y288 498 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 C7orf61Q8IZ16 206 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 TRMT2BQ96GJ1 504 aaKnown RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 TSPAN10Q9H1Z9 355 aaPredicted RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 GOLGA4Q13439 2230 aaKnown RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 RGPD5Q99666 1765 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 TMEM221A6NGB7 291 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 ADAM23O75077 832 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 LIPCP11150 499 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 KIR2DS3Q14952 304 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 EID2Q8N6I1 236 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 OR5L2Q8NGL0 311 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 OR13C2Q8NGS9 318 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 PHYHIPQ92561 330 aa12□□□□□ -0.49
COL3A1-201ENST00000304636 RRNAD1Q96FB5 475 aaKnown RBP12□□□□□ -0.49
COL3A1-201ENST00000304636 SORCS2Q96PQ0 1159 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms