RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 POU4F3Q15319 338 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 QRSL1Q9H0R6 528 aaKnown RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 LRFN1Q9P244 771 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 RBMS1P29558 406 aaKnown RBP13.02□□□□□ -0.32
PRKCB-201ENST00000303531 HTR3AP46098 478 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 CSNK1A1P48729 337 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 GPR18Q14330 331 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 Q6ZSR9 355 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 CD163Q86VB7 1156 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 BEST4Q8NFU0 473 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 ADAM29Q9UKF5 820 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 ARHGAP33O14559 1287 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 IL13RA1P78552 427 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 MEX3BQ6ZN04 569 aaKnown RBP13.02□□□□□ -0.32
PRKCB-201ENST00000303531 SENP5Q96HI0 755 aaPredicted RBP13.02□□□□□ -0.32
PRKCB-201ENST00000303531 CHRDQ9H2X0 955 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 UBQLN4Q9NRR5 601 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 HSFX1Q9UBD0 423 aa13.02□□□□□ -0.32
PRKCB-201ENST00000303531 TCRBV5S1A1TA0A578 114 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 SLC22A6Q4U2R8 563 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 VASNQ6EMK4 673 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 MFSD9Q8NBP5 474 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 UBTD2Q8WUN7 234 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 PLEKHA3Q9HB20 300 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 AGPAT2O15120 278 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 F3P13726 295 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 ITGB8P26012 769 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 PDE7AQ13946 482 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 OR5M10Q6IEU7 315 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 SPIN2AQ99865 258 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 SPIN2BQ9BPZ2 258 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 CA5BQ9Y2D0 317 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 EFCAB7A8K855 629 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 CXADRP78310 365 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 LTBQ06643 244 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 SMAD2Q15796 467 aaKnown RBP13.02□□□□□ -0.33
PRKCB-201ENST00000303531 LCN10Q6JVE6 187 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.332e-6■□□□□ 10.1
PRKCB-201ENST00000303531 OR10A5Q9H207 317 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 OR10A2Q9H208 303 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 MED20Q9H944 212 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 TP53P04637 393 aaPredicted RBP13.02□□□□□ -0.33
PRKCB-201ENST00000303531 F13BP05160 661 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 IDUAP35475 653 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 OR7E24Q6IFN5 339 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 FBXO46Q6PJ61 603 aaPredicted RBP13.02□□□□□ -0.33
PRKCB-201ENST00000303531 SLC35F3Q8IY50 421 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 OR7G2Q8NG99 324 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 FNDC9Q8TBE3 224 aa13.02□□□□□ -0.33
PRKCB-201ENST00000303531 KDM4EB2RXH2 506 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 TUBB3Q13509 450 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 HACD4Q5VWC8 232 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 OR14K1Q8NGZ2 314 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 OR1S1Q8NH92 325 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 MZB1Q8WU39 189 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 ELOVL3Q9HB03 270 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 CD300AQ9UGN4 299 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 C17orf113A0A1B0GUU1 675 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 TMEM269A0A1B0GVZ9 245 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 NFATC4Q14934 902 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 EVA1AQ9H8M9 152 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 SRPK3Q9UPE1 567 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 RCE1Q9Y256 329 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 HS3ST2Q9Y278 367 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 SSTR2P30874 369 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 APLNRP35414 380 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 VEGFBP49765 207 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 MELKQ14680 651 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 TBPL2Q6SJ96 375 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 TMEM185AQ8NFB2 350 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 ZBTB8AQ96BR9 441 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 TBC1D20Q96BZ9 403 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 NT5DC2Q9H857 520 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 GABRA5P31644 462 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 UBE2NLQ5JXB2 153 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 METAP1DQ6UB28 335 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 TPRA1Q86W33 373 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 TMEFF1Q8IYR6 380 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 FOXRED1Q96CU9 486 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 PTRH2Q9Y3E5 179 aaKnown RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 H0YGG7 62 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 SERPINE2P07093 398 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 GPR139Q6DWJ6 353 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 SBSNQ6UWP8 590 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 DNMT3BQ9UBC3 853 aaKnown RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 OTOL1A6NHN0 477 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 H3BQ06 376 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 GAPDHSO14556 408 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 RPS25P62851 125 aaKnown RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 APOOLQ6UXV4 268 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 FCRLAQ7L513 359 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 LRRC56Q8IYG6 542 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-201ENST00000303531 SLC6A14Q9UN76 642 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 ZNF281Q9Y2X9 895 aa13.01□□□□□ -0.33
PRKCB-201ENST00000303531 C4AP0C0L4 1744 aa13□□□□□ -0.33
PRKCB-201ENST00000303531 FURINP09958 794 aa13□□□□□ -0.33
PRKCB-201ENST00000303531 LBX1P52954 281 aa13□□□□□ -0.33
PRKCB-201ENST00000303531 TAS2R20P59543 309 aa13□□□□□ -0.33
PRKCB-201ENST00000303531 EEF1A1P68104 462 aaKnown RBP13□□□□□ -0.33
PRKCB-201ENST00000303531 RPL22L1Q6P5R6 122 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms