RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 OR11A1Q9GZK7 315 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 USP36Q9P275 1121 aaKnown RBP9.76□□□□□ -0.85
CLIP1-201ENST00000302528 NALCNQ8IZF0 1738 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 FUOMA2VDF0 154 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF217O75362 1048 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 M6PRP20645 277 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 SSTR2P30874 369 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 IDUAP35475 653 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 C9orf135Q5VTT2 229 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 FAM109AQ8N4B1 249 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 OR4Q3Q8NH05 313 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 TMEM239Q8WW34 195 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 SORCS2Q96PQ0 1159 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 NTPCRQ9BSD7 190 aaKnown RBP9.76□□□□□ -0.85
CLIP1-201ENST00000302528 FAM212BQ9NTI7 297 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-201ENST00000302528 GOLT1BQ9Y3E0 138 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 TOPAZ1Q8N9V7 1692 aa9.76□□□□□ -0.85
CLIP1-201ENST00000302528 A0A0D9SG52 128 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 LOC285095A0A1B0GVY8 99 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 SCO1O75880 301 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 KCNE1P15382 129 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 CBR1P16152 277 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 SLC7A9P82251 487 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 CST6Q15828 149 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 LPAL2Q16609 132 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 OR9Q2Q8NGE9 314 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 OR8U1Q8NH10 309 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 HPSE2Q8WWQ2 592 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 LHPPQ9H008 270 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 LIN7BQ9HAP6 207 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 ADAMTS6Q9UKP5 1117 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 A0A0G2JLL6 359 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TIMM8AO60220 97 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 KCNK2O95069 426 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 SEMA4FO95754 770 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 CFHP08603 1231 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 F3P13726 295 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 MAKP20794 623 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 FLI1Q01543 452 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TESK1Q15569 626 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TMEM31Q5JXX7 168 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 PRRT2Q7Z6L0 340 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 BPIFB2Q8N4F0 458 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 ENDOVQ8N8Q3 282 aaKnown RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 LURAP1Q96LR2 239 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 C1orf74Q96LT6 269 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 NPY6RQ99463 290 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 KATNB1Q9BVA0 655 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 PBX4Q9BYU1 374 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 KDM3BQ7LBC6 1761 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 GOLGA4Q13439 2230 aaKnown RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 HEPACAM2A8MVW5 462 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 HCRTO43612 131 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 UPK1BO75841 260 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 OR7C1O76099 320 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 OPN1LWP04000 364 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 SNHG28P0DPA3 235 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TGM1P22735 817 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 SORDQ00796 357 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TNK1Q13470 666 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TAF9Q16594 264 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 FAM74A1Q5RGS3 127 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 DCAF12L1Q5VU92 463 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 DESI1Q6ICB0 168 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 GDPGP1Q6ZNW5 385 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 CHCHD4Q8N4Q1 142 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 SIGLEC10Q96LC7 697 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 VPS25Q9BRG1 176 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 PISDQ9UG56 409 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 COPS3Q9UNS2 423 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 SLC22A7Q9Y694 548 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TMEM269A0A1B0GVZ9 245 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 POM121CA8CG34 1229 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 MCRIP1C9JLW8 97 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 SLC16A7O60669 478 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 KCNK5O95279 499 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 CTRB1P17538 263 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 IL3RAP26951 378 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 GIFP27352 417 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 ZXDBP98169 803 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 MFGE8Q08431 387 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 IKZF1Q13422 519 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 PIN1Q13526 163 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-201ENST00000302528 GPR176Q14439 515 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TRIM61Q5EBN2 209 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 EMC10Q5UCC4 262 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 CTRB2Q6GPI1 263 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 KANSL1Q7Z3B3 1105 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 ADGRF3Q8IZF5 1079 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 ULBP2Q9BZM5 246 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 TGIF2Q9GZN2 237 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF696Q9H7X3 374 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 C5AR2Q9P296 337 aa9.75□□□□□ -0.85
CLIP1-201ENST00000302528 A0A0B4J2A0 478 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 S1PR4O95977 384 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 LAMP1P11279 417 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 C5AR1P21730 350 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 DPP4P27487 766 aa9.74□□□□□ -0.85
CLIP1-201ENST00000302528 HTR3AP46098 478 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms