RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CADM2Q8N3J6 435 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 FAM109AQ8N4B1 249 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 CISD2Q8N5K1 135 aaKnown RBP8.57□□□□□ -1.04
RFX3-201ENST00000302303 SLC7A13Q8TCU3 470 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 LRTOMTQ8WZ04 291 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 SNRNP40Q96DI7 357 aaKnown RBP8.57□□□□□ -1.04
RFX3-201ENST00000302303 SLC41A3Q96GZ6 507 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 RSRC1Q96IZ7 334 aaKnown RBP8.57□□□□□ -1.04
RFX3-201ENST00000302303 MRGPRX4Q96LA9 322 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 PIP5K1AQ99755 562 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 PKP2Q99959 881 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 DEFB127Q9H1M4 99 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 TSPAN10Q9H1Z9 355 aaPredicted RBP8.57□□□□□ -1.04
RFX3-201ENST00000302303 SLC6A15Q9H2J7 730 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 PTGES2Q9H7Z7 377 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 CACYBPQ9HB71 228 aaKnown RBP8.57□□□□□ -1.04
RFX3-201ENST00000302303 AGPAT4Q9NRZ5 378 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 SLC7A7Q9UM01 511 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 RPH3AQ9Y2J0 694 aaPredicted RBP8.57□□□□□ -1.04
RFX3-201ENST00000302303 ZNF337Q9Y3M9 751 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 A0A087WUU8 490 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 TRBV4-1A0A0J9YWV2 114 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 A0A1W2PRQ8 180 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 ZC3H12DA2A288 527 aaKnown RBP8.56□□□□□ -1.04
RFX3-201ENST00000302303 ZNHIT1O43257 154 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 CHP2O43745 196 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 STAMBPO95630 424 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 NUDT14O95848 222 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 SFTPCP11686 197 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 TCEA1P23193 301 aaKnown RBP8.56□□□□□ -1.04
RFX3-201ENST00000302303 PLGLB1Q02325 96 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 C19orf57Q0VDD7 668 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 KLRB1Q12918 225 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 DGCR6Q14129 220 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 SLC10A1Q14973 349 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 OR2T5Q6IEZ7 315 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 AAGABQ6PD74 315 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 ULK3Q6PHR2 472 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 TBPL2Q6SJ96 375 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 GRINAQ7Z429 371 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 AMIGO2Q86SJ2 522 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 RANBP3LQ86VV4 465 aaPredicted RBP8.56□□□□□ -1.04
RFX3-201ENST00000302303 SLC22A16Q86VW1 577 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 TEX19Q8NA77 164 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 OR2T29Q8NH02 315 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 ZNF563Q8TA94 476 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 TMEM255BQ8WV15 326 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 ZBTB8AQ96BR9 441 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 POLR2J2Q9GZM3 115 aaKnown RBP8.56□□□□□ -1.04
RFX3-201ENST00000302303 POLR2J3Q9H1A7 115 aaKnown RBP8.56□□□□□ -1.04
RFX3-201ENST00000302303 C12orf10Q9HB07 376 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 TMEM27Q9HBJ8 222 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 HHATLQ9HCP6 504 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 MEPEQ9NQ76 525 aaPredicted RBP8.56□□□□□ -1.04
RFX3-201ENST00000302303 SPRR3Q9UBC9 169 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 NKX1-2Q9UD57 310 aaPredicted RBP8.56□□□□□ -1.04
RFX3-201ENST00000302303 SLC13A4Q9UKG4 626 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 SLC6A5Q9Y345 797 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 RRP15Q9Y3B9 282 aaKnown RBP8.56□□□□□ -1.04
RFX3-201ENST00000302303 TESMINQ9Y4I5 508 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 LYVE1Q9Y5Y7 322 aa8.56□□□□□ -1.04
RFX3-201ENST00000302303 TMED7-TICAM2A0A0A6YYA0 188 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 TMEM72A0PK05 275 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 H0YC42 278 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ATXN7O15265 892 aaPredicted RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 CLOCKO15516 846 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 HNRNPRO43390 633 aaKnown RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 MGRN1O60291 552 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 FZD7O75084 574 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 TRAPPC6AO75865 159 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 CST1P01037 141 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 THRBP10828 461 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 GP1BBP13224 206 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ZNF17P17021 662 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ZNF24P17028 368 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 RRM2P31350 389 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 APOBEC1P41238 236 aaKnown RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 STARP49675 285 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 LHX2P50458 406 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 POLR2HP52434 150 aaKnown RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 SUCLG1P53597 346 aaKnown RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 UGT2B15P54855 530 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 TPD52P55327 224 aaPredicted RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 TAS2R41P59536 307 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 LTBQ06643 244 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ST3GAL3Q11203 375 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 MERTKQ12866 999 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ATP6AP1Q15904 470 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 CTU2Q2VPK5 515 aaKnown RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 NHSL2Q5HYW2 709 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ALG10BQ5I7T1 473 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 SWT1Q5T5J6 900 aaKnown RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 ANKRD34AQ69YU3 496 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 VASNQ6EMK4 673 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 ZNF770Q6IQ21 691 aaPredicted RBP8.55□□□□□ -1.04
RFX3-201ENST00000302303 ZFP1Q6P2D0 407 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 GGNQ86UU5 652 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 P3H2Q8IVL5 708 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 HS3ST5Q8IZT8 346 aa8.55□□□□□ -1.04
RFX3-201ENST00000302303 NEIL3Q8TAT5 605 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms