RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 KLHL26Q53HC5 615 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 BRIX1Q8TDN6 353 aaKnown RBP19.57■□□□□ 0.72
SOX17-201ENST00000297316 HS6ST2Q96MM7 605 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 KLHDC3Q9BQ90 382 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 ZNF426Q9BUY5 554 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 SLIRPQ9GZT3 109 aaKnown RBP19.57■□□□□ 0.72
SOX17-201ENST00000297316 CFL2Q9Y281 166 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 MED31Q9Y3C7 131 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 MPDZO75970 2070 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 TRAV27A0A087WT01 109 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 FUOMA2VDF0 154 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 VSTM2BA6NLU5 285 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 GNB5O14775 395 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 REM1O75628 298 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 UTS2O95399 124 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 RAB36O95755 333 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 EMP2P54851 167 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 ITGADQ13349 1161 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 TRA2AQ13595 282 aaKnown RBP eCLIP19.57■□□□□ 0.72
SOX17-201ENST00000297316 SPHARQ15513 63 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 ALG10BQ5I7T1 473 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 TMPRSS11FQ6ZWK6 438 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 IGFN1Q86VF2 1251 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 LSMEM1Q8N8F7 131 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 THAP3Q8WTV1 239 aaPredicted RBP19.57■□□□□ 0.72
SOX17-201ENST00000297316 HINT3Q9NQE9 182 aaKnown RBP19.57■□□□□ 0.72
SOX17-201ENST00000297316 MRPS18AQ9NVS2 196 aaKnown RBP19.57■□□□□ 0.72
SOX17-201ENST00000297316 PCDHGB2Q9Y5G2 931 aa19.57■□□□□ 0.72
SOX17-201ENST00000297316 PMS2P1A4D2B8 440 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 FAM183AA6NL82 134 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 CPNE3O75131 537 aaKnown RBP19.56■□□□□ 0.72
SOX17-201ENST00000297316 ICOSLGO75144 302 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 GP1BAP07359 652 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 CD97P48960 835 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 RNLSQ5VYX0 342 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 HLA-DQA1Q5Y7H0 255 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 ART5Q96L15 291 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 MND1Q9BWT6 205 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 CCRL2O00421 344 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 BHLHE40O14503 412 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 SCG5P05408 212 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 MTNR1AP48039 350 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 CTBP2P56545 445 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 DGUOKQ16854 277 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 RGS21Q2M5E4 152 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 CBLN3Q6UW01 205 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 SLC29A4Q7RTT9 530 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 APCDD1LQ8NCL9 501 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 SH3YL1Q96HL8 342 aaPredicted RBP19.56■□□□□ 0.72
SOX17-201ENST00000297316 TRIM2Q9C040 744 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 UBQLN4Q9NRR5 601 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 SIGLEC7Q9Y286 467 aa19.56■□□□□ 0.72
SOX17-201ENST00000297316 WWP2O00308 870 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 SOCS6O14544 535 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 GALR2O43603 387 aaPredicted RBP19.55■□□□□ 0.72
SOX17-201ENST00000297316 SAGP10523 405 aaPredicted RBP19.55■□□□□ 0.72
SOX17-201ENST00000297316 IDUAP35475 653 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 CD79BP40259 229 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 PSMD4P55036 377 aaKnown RBP19.55■□□□□ 0.72
SOX17-201ENST00000297316 CDH11P55287 796 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 SLC35F1Q5T1Q4 408 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 BTLAQ7Z6A9 289 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 ADCK1Q86TW2 530 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 CYP4Z2PQ8N1L4 340 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 NFAM1Q8NET5 270 aaPredicted RBP19.55■□□□□ 0.72
SOX17-201ENST00000297316 PROKR2Q8NFJ6 384 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 PHOSPHO1Q8TCT1 267 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 WDR77Q9BQA1 342 aaPredicted RBP19.55■□□□□ 0.72
SOX17-201ENST00000297316 CRB3Q9BUF7 120 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 PRRG3Q9BZD7 231 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 FGF20Q9NP95 211 aaPredicted RBP19.55■□□□□ 0.72
SOX17-201ENST00000297316 B3GNT3Q9Y2A9 372 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 FREM2Q5SZK8 3169 aa19.55■□□□□ 0.72
SOX17-201ENST00000297316 GMFGO60234 142 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 GPX5O75715 221 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 ONECUT2O95948 504 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 MC2RQ01718 297 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 FHL1Q13642 323 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 OR2G6Q5TZ20 316 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 FNDC7Q5VTL7 733 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 SMARCD3Q6STE5 483 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 LINC00114Q6XXX2 140 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 ZNF550Q7Z398 422 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 TMCO5AQ8N6Q1 288 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 OR51A7Q8NH64 312 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 METTL21AQ8WXB1 218 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 ZNF524Q96C55 264 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 EVA1AQ9H8M9 152 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 MED20Q9H944 212 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 HPGDP15428 266 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 UGT2B10P36537 528 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 RAB40BQ12829 278 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 MRPL14Q6P1L8 145 aaKnown RBP19.54■□□□□ 0.72
SOX17-201ENST00000297316 PAPD4Q6PIY7 484 aaKnown RBP19.54■□□□□ 0.72
SOX17-201ENST00000297316 B3GLCTQ6Y288 498 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 CPOQ8IVL8 374 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 ZNF441Q8N8Z8 693 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 OR4F15Q8NGB8 312 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 ULBP3Q9BZM4 244 aa19.54■□□□□ 0.72
SOX17-201ENST00000297316 MYL12BO14950 172 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms