RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 DKKL1Q9UK85 242 aa11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 OR2T1O43869 369 aa11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 DPM1O60762 260 aa11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 CLDN7O95471 211 aa11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 RPLP2P05387 115 aaKnown RBP11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 SYPP08247 313 aa11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 ITPK1Q13572 414 aa11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 TRAM1L1Q8N609 369 aa11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.07□□□□□ -0.64
SHROOM3-201ENST00000296043 SPATA31C2B4DYI2 1134 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 SYT7O43581 403 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 PMPCAQ10713 525 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 CEBPEQ15744 281 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 CPA6Q8N4T0 437 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 C2orf42Q9NWW7 574 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 AK1P00568 194 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 MC3RP41968 323 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 WASP42768 502 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ERVK-16P61578 105 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ASAH1Q13510 395 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 AGTRAPQ6RW13 159 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC38A6Q8IZM9 456 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 SHPRHQ149N8 1683 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ACP5P13686 325 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 MFGE8Q08431 387 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC2A13Q96QE2 648 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 KATNB1Q9BVA0 655 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 TAF9BQ9HBM6 251 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ANKRD31Q8N7Z5 1873 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 NFKBIEO00221 500 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ACSM4P0C7M7 580 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 RAB5AP20339 215 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 GDI1P31150 447 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 RAB13P51153 203 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 TEKQ02763 1124 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ZBTB7AO95365 584 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 LAMP1P11279 417 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 HBMQ6B0K9 141 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 CLECL1Q8IZS7 167 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 BPIFCQ8NFQ6 507 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 SCAMP5Q8TAC9 235 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF629Q9UEG4 869 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 PCGF2P35227 344 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 ACVRL1P37023 503 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 OR6S1Q8NH40 331 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 TINAGL1Q9GZM7 467 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 M0R143 59 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 IL33O95760 270 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 CDS1Q92903 461 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 QTRT2Q9H974 415 aaKnown RBP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 EXOSC3Q9NQT5 275 aaKnown RBP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 EPHX1P07099 455 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 METTL15P1P0C7V9 234 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 SCGB1C2P0DMR2 95 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 GATMP50440 423 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 MLLT11Q13015 90 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 Q5PR19 223 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC43A2Q8N370 569 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 TVP23CQ96ET8 276 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 AKR1E2Q96JD6 320 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 METTL7AQ9H8H3 244 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 GMPR2Q9P2T1 348 aaKnown RBP11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 UBIAD1Q9Y5Z9 338 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 V9GY05 133 aa11.06□□□□□ -0.64
SHROOM3-201ENST00000296043 HIDE1A8MVS5 230 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 CCSO14618 274 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 TSPAN6O43657 245 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SDHAP31040 664 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 LFNGQ8NES3 379 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 MACROD1Q9BQ69 325 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF860A6NHJ4 632 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 KIAA0355O15063 1070 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 PNMTP11086 282 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 PDLIM3Q53GG5 364 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 C6orf120Q7Z4R8 191 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 RNF167Q9H6Y7 350 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 CSAG2Q9Y5P2 127 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 G3V2L1 256 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 GPR137BO60478 399 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 HPNP05981 417 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC7A9P82251 487 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 ARSJQ5FYB0 599 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 LILRA2Q8N149 483 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 C15orf54Q8N8G6 183 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 CERS4Q9HA82 394 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 LIN7BQ9HAP6 207 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNFX1Q9P2E3 1918 aaKnown RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 PSMB3P49720 205 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 YBEYP58557 167 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 ZBTB37Q5TC79 503 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SBSNQ6UWP8 590 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 VSIG10LQ86VR7 867 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 OR2G3Q8NGZ4 309 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 FBXL18Q96ME1 805 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 OR51I2Q9H344 312 aa11.05□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC9B1P1A6NJY1 282 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms