RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 CMTM3Q96MX0 182 aa12.63□□□□□ -0.39
NCSTN-201ENST00000294785 ABHD1Q96SE0 405 aa12.63□□□□□ -0.39
NCSTN-201ENST00000294785 KLHL1Q9NR64 748 aa12.63□□□□□ -0.39
NCSTN-201ENST00000294785 ST6GALNAC2Q9UJ37 374 aa12.63□□□□□ -0.39
NCSTN-201ENST00000294785 LOC105369274A0A096LPK9 316 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 A0A0A6YYJ9 748 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 H0YGG7 62 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 OGG1O15527 345 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 HYAL3O43820 417 aaPredicted RBP12.62□□□□□ -0.39
NCSTN-201ENST00000294785 ARF3P61204 181 aaPredicted RBP12.62□□□□□ -0.39
NCSTN-201ENST00000294785 C19orf57Q0VDD7 668 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 TMEM196Q5HYL7 178 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 ZNF782Q6ZMW2 699 aaPredicted RBP12.62□□□□□ -0.39
NCSTN-201ENST00000294785 RNF44Q7L0R7 432 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 OR4N4Q8N0Y3 316 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 LRRC17Q8N6Y2 441 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 SMIM19Q96E16 107 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 KXD1Q9BQD3 176 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 MED28Q9H204 178 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 TMEM74BQ9NUR3 256 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 A0A1B0GWA3 101 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 RFPL3O75679 317 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 GATBO75879 557 aaKnown RBP12.62□□□□□ -0.39
NCSTN-201ENST00000294785 OR2T7P0C7T2 308 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 POLR2CP19387 275 aaPredicted RBP12.62□□□□□ -0.39
NCSTN-201ENST00000294785 PYCR1P32322 319 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 HTR2BP41595 481 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 RAG2P55895 527 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 SLC36A2Q495M3 483 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 LAMTOR1Q6IAA8 161 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 OR2T27Q8NH04 317 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 BAHD1Q8TBE0 780 aaPredicted RBP12.62□□□□□ -0.39
NCSTN-201ENST00000294785 TTC9Q92623 222 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 EMC7Q9NPA0 242 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 ZNF275Q9NSD4 429 aaPredicted RBP12.62□□□□□ -0.39
NCSTN-201ENST00000294785 ING4Q9UNL4 249 aa12.62□□□□□ -0.39
NCSTN-201ENST00000294785 OR6C74A6NCV1 312 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 ZNF860A6NHJ4 632 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 C2orf74A8MZ97 194 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 GALR3O60755 368 aaPredicted RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 STOMP27105 288 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 ACVR1BP36896 505 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 EXOSC7Q15024 291 aaKnown RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CA13Q8N1Q1 262 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 TOMM5Q8N4H5 51 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 OR5J2Q8NH18 312 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 GRHL3Q8TE85 626 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 PHYHIPQ92561 330 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 MRPL48Q96GC5 212 aaKnown RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 OR2M2Q96R28 347 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 RANBP3Q9H6Z4 567 aaPredicted RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 MCCC2Q9HCC0 563 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 FLRT3Q9NZU0 649 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 GXYLT2A0PJZ3 443 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CTDSPLO15194 276 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 FLRT2O43155 660 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 TMEM127O75204 238 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CLUP10909 449 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 GBX2P52951 348 aaPredicted RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 GPR18Q14330 331 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CDK5R1Q15078 307 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 SLC25A35Q3KQZ1 300 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 BCL2L15Q5TBC7 163 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 LINC00114Q6XXX2 140 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 KRT74Q7RTS7 529 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 RD3Q7Z3Z2 195 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CADM2Q8N3J6 435 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 DNAJC5GQ8N7S2 189 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 TMEM52Q8NDY8 209 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 OR10G6Q8NH81 332 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CCL4L1Q8NHW4 92 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 HAVCR2Q8TDQ0 301 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 C17orf50Q8WW18 174 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 THAP4Q8WY91 577 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 FAM3CQ92520 227 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CNOT9Q92600 299 aaKnown RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 SNAPC3Q92966 411 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 YIPF5Q969M3 257 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 TNFRSF13CQ96RJ3 184 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CNN2Q99439 309 aaKnown RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 LMF2Q9BU23 707 aaKnown RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 TMEM168Q9H0V1 697 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 SLC6A17Q9H1V8 727 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CHRNA9Q9UGM1 479 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 TEKT2Q9UIF3 430 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 MRPS2Q9Y399 296 aaKnown RBP12.61□□□□□ -0.39
NCSTN-201ENST00000294785 HSPB11Q9Y547 144 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 A0A1B0GTQ1 180 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 AGRPO00253 132 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CA3P07451 260 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CT62P0C5K7 136 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 SLC35E2P0CK97 266 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 FHL1Q13642 323 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CDONQ4KMG0 1287 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 CCDC58Q4VC31 144 aa12.61□□□□□ -0.39
NCSTN-201ENST00000294785 ALG10BQ5I7T1 473 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms