RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 NXNL2Q5VZ03 156 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 PPP1R3BQ86XI6 285 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 CMTM1Q8IZ96 169 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 PARP16Q8N5Y8 322 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 OR51Q1Q8NH59 317 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 EMC3Q9P0I2 261 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 VDAC3Q9Y277 283 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 DCDC2BA2VCK2 349 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 GABRPO00591 440 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 P2RX6O15547 441 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SCG5P05408 212 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 TFAP2AP05549 437 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 OR2T7P0C7T2 308 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 FOSL2P15408 326 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 HOXC5Q00444 222 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SPCS2Q15005 226 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 TANGO2Q6ICL3 276 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 MRPL21Q7Z2W9 205 aaKnown RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 FUNDC1Q8IVP5 155 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 OR2T27Q8NH04 317 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 FAM71F1Q96KD3 344 aaPredicted RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SLC22A12Q96S37 553 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 C1QTNF3Q9BXJ4 246 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 KIR3DX1Q9H7L2 352 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 DIMT1Q9UNQ2 313 aaKnown RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 CCL26Q9Y258 94 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 RASD1Q9Y272 281 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 ADAM18Q9Y3Q7 739 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 NHSQ6T4R5 1651 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SLC16A7O60669 478 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 PKLRP30613 574 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 HTR2BP41595 481 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 POLR2HP52434 150 aaKnown RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 ELMOD2Q8IZ81 293 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 STEAP2Q8NFT2 490 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 OR7G1Q8NGA0 311 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 OR13F1Q8NGS4 319 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF486Q96H40 463 aaPredicted RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 GPR78Q96P69 363 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 N4BP2Q86UW6 1770 aaPredicted RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 AQP9O43315 295 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SLC35E2P0CK97 266 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 ICAM2P13598 275 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 MRPL58Q14197 206 aaKnown RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SLC48A1Q6P1K1 146 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 CLDN22Q8N7P3 220 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SPPL3Q8TCT6 385 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 ZFPM2Q8WW38 1151 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 AMDHD1Q96NU7 426 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SORCS2Q96PQ0 1159 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 TMEM168Q9H0V1 697 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 CXorf36Q9H7Y0 433 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SIAEQ9HAT2 523 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 PTTG3PQ9NZH4 202 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 TRBV11-1A0A0K0K1C0 115 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SERINC4A6NH21 518 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 HPGDSO60760 199 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 IGLV3-27P01718 113 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 JUNBP17275 347 aaPredicted RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 ARNTP27540 789 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 PSMB10P40306 273 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 RPS5P46782 204 aaKnown RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 FGL2Q14314 439 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 NHSL2Q5HYW2 709 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 GTPBP8Q8N3Z3 284 aaPredicted RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF611Q8N823 705 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
PTCD1-201ENST00000292478 SEMA6CQ9H3T2 930 aa11.93□□□□□ -0.5
PTCD1-201ENST00000292478 MEN1O00255 615 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 TNFRSF10CO14798 259 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 YKT6O15498 198 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 ZDHHC11BP0C7U3 371 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 TAS2R19P59542 299 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 FAM160A2Q8N612 972 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 RHBDD1Q8TEB9 315 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 PHYHIPQ92561 330 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 NPPBP16860 134 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 GK2Q14410 553 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-201ENST00000292478 RTN4RL1Q86UN2 441 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-201ENST00000292478 OR2M2Q96R28 347 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 PLEKHJ1Q9NW61 149 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 USP54Q70EL1 1684 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 hCG_1807616A0A1W2PRN6 198 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 B8ZZF3 427 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 CR2P20023 1033 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 LTB4RQ15722 352 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 VRK3Q8IV63 474 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 MMP28Q9H239 520 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 C1GALT1Q9NS00 363 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 PLEK2Q9NYT0 353 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 SLC5A10A0PJK1 596 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 HMX2A2RU54 273 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 TMEM212A6NML5 194 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 GAPDHSO14556 408 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-201ENST00000292478 FPR3P25089 353 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 CSNK1G2P78368 415 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 TMEM201Q5SNT2 666 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 RFLNAQ6ZTI6 216 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms