RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PIK3IP1Q96FE7 263 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 GMPPAQ96IJ6 420 aaPredicted RBP8.73□□□□□ -1.01
CCDC58-201ENST00000291458 MAELQ96JY0 434 aaKnown RBP8.73□□□□□ -1.01
CCDC58-201ENST00000291458 MRGPRX4Q96LA9 322 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 C7orf26Q96N11 449 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 WFIKKN1Q96NZ8 548 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 SLC39A3Q9BRY0 314 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 OR11A1Q9GZK7 315 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 RMND5AQ9H871 391 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 CTPS2Q9NRF8 586 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 INTS9Q9NV88 658 aaKnown RBP8.73□□□□□ -1.01
CCDC58-201ENST00000291458 ZIM2Q9NZV7 527 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 TESMINQ9Y4I5 508 aa8.73□□□□□ -1.01
CCDC58-201ENST00000291458 A0A1W2PPR1 153 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 HMGB1P1B2RPK0 211 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 ADAMDEC1O15204 470 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 SS18L1O75177 396 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 SASH3O75995 380 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 SOX30O94993 753 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 CGAP01215 116 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 IL6P05231 212 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 FESP07332 822 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 GKN3PP0CG01 181 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 BMP4P12644 408 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 ENPP1P22413 925 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 UGT2B10P36537 528 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 PGM1P36871 562 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 IDH2P48735 452 aaKnown RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 IDH3AP50213 366 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 DSTNP60981 165 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 TMEM201Q5SNT2 666 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 MRPL2Q5T653 305 aaKnown RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 EPGNQ6UW88 154 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 ZNF836Q6ZNA1 936 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 PLEKHM3Q6ZWE6 761 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 NUFIP2Q7Z417 695 aaKnown RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 VRK2Q86Y07 508 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 WFDC8Q8IUA0 241 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 OR6K3Q8NGY3 331 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 RNF128Q8TEB7 428 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 CPNE4Q96A23 557 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 ITCHQ96J02 903 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 ZNF300Q96RE9 604 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 SLC38A1Q9H2H9 487 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 UBTD1Q9HAC8 227 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 TPT1P8Q9HAU6 139 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 BRD7Q9NPI1 651 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 TIGARQ9NQ88 270 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 POLE3Q9NRF9 147 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 SDR39U1Q9NRG7 319 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 PAQR5Q9NXK6 330 aaPredicted RBP8.72□□□□□ -1.01
CCDC58-201ENST00000291458 CCDC167Q9P0B6 97 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 KLHL13Q9P2N7 655 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 P2RX2Q9UBL9 471 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 NDRG3Q9UGV2 375 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 ST6GALNAC2Q9UJ37 374 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 SLC35A3Q9Y2D2 325 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 FREM1Q5H8C1 2179 aa8.72□□□□□ -1.01
CCDC58-201ENST00000291458 ADGRG4Q8IZF6 3080 aa8.71□□□□□ -1.01
CCDC58-201ENST00000291458 CCDC168Q8NDH2 2452 aa8.71□□□□□ -1.01
CCDC58-201ENST00000291458 FAM234BA2RU67 622 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 C16orf97H3BN30 126 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 SULT2B1O00204 365 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 ADAM11O75078 769 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 HRGP04196 525 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 CD8BP10966 210 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 CD1EP15812 388 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 H2AFXP16104 143 aaPredicted RBP8.71□□□□□ -1.02
CCDC58-201ENST00000291458 IL7RP16871 459 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 DNASE1P24855 282 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 EEF1A1P68104 462 aaKnown RBP8.71□□□□□ -1.02
CCDC58-201ENST00000291458 KCNJ10P78508 379 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 KEAP1Q14145 624 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 GUSBP1Q15486 140 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 AGKQ53H12 422 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 SYT14P1Q58G82 188 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 EEF1A1P5Q5VTE0 462 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 PAMR1Q6UXH9 720 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 STK32CQ86UX6 486 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 CXorf67Q86X51 503 aaPredicted RBP8.71□□□□□ -1.02
CCDC58-201ENST00000291458 CADM2Q8N3J6 435 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 FAM71CQ8NEG0 241 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 TMEM234Q8WY98 164 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 ST8SIA1Q92185 356 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 MAL2Q969L2 176 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 TMEM19Q96HH6 336 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 DACH2Q96NX9 599 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 TRNT1Q96Q11 434 aaKnown RBP8.71□□□□□ -1.02
CCDC58-201ENST00000291458 CACYBPQ9HB71 228 aaKnown RBP8.71□□□□□ -1.02
CCDC58-201ENST00000291458 NPHS2Q9NP85 383 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 SERINC1Q9NRX5 453 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 ACER3Q9NUN7 267 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 RLIMQ9NVW2 624 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.71□□□□□ -1.02
CCDC58-201ENST00000291458 PDZD2O15018 2839 aa8.71□□□□□ -1.02
CCDC58-201ENST00000291458 DCHS2Q6V1P9 2916 aa8.7□□□□□ -1.02
CCDC58-201ENST00000291458 LRBAP50851 2863 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms