RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PINK1Q9BXM7 581 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 PTGES2Q9H7Z7 377 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 CLEC2LP0C7M8 214 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 AVPR2P30518 371 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 CAPZA1P52907 286 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 SLC35A2P78381 396 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 SGCBQ16585 318 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 GLT8D1Q68CQ7 371 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 LYPD4Q6UWN0 246 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 C6orf120Q7Z4R8 191 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 ANGPTL6Q8NI99 470 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 STK35Q8TDR2 534 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 OR5P2Q8WZ92 322 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 TMEM19Q96HH6 336 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 AMBRA1Q9C0C7 1298 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 FN3KQ9H479 309 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 MYNNQ9NPC7 610 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 FBXL2Q9UKC9 423 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 RCE1Q9Y256 329 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 FRKP42685 505 aaPredicted RBP10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 CTU2Q2VPK5 515 aaKnown RBP10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 DEFB134Q4QY38 66 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 C18orf63Q68DL7 685 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 PAPD4Q6PIY7 484 aaKnown RBP10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 SERPINA11Q86U17 422 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 PTRH1Q86Y79 214 aaKnown RBP10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 OR5D16Q8NGK9 328 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 IFI44Q8TCB0 444 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 ZFPM2Q8WW38 1151 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 SPRYD4Q8WW59 207 aaPredicted RBP10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 LAMP5Q9UJQ1 280 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 KCND3Q9UK17 655 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 SLC9B1P1A6NJY1 282 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 ZNF705GA8MUZ8 300 aaPredicted RBP10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 SCDO00767 359 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 PEX14O75381 377 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 ARNTP27540 789 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 RRADP55042 308 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 CBLL1Q75N03 491 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 CPOQ8IVL8 374 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 ANKRD53Q8N9V6 530 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 BBS10Q8TAM1 723 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 DCUN1D4Q92564 292 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 ELP4Q96EB1 424 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 HRH4Q9H3N8 390 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 EMC7Q9NPA0 242 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 KCNJ16Q9NPI9 418 aa10.63□□□□□ -0.71
NPC1L1-201ENST00000289547 RPS10-NUDT3A0A1W2PQS6 291 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 C1orf226A1L170 272 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 BLOC1S5-TXNDC5H3BN57 136 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 IFNA2P01563 188 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 S100PP25815 95 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 RPS19P39019 145 aaKnown RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SORDQ00796 357 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 DOC2AQ14183 400 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 PLEKHN1Q494U1 663 aaPredicted RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 ABHD17BQ5VST6 288 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 KANSL1Q7Z3B3 1105 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SPRED2Q7Z698 418 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 COMTD1Q86VU5 262 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 CLDN22Q8N7P3 220 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 GABRG3Q99928 467 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 ALG8Q9BVK2 526 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 C1QTNF2Q9BXJ5 285 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 TXNL4BQ9NX01 149 aaKnown RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 KCNIP3Q9Y2W7 256 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SCAMP2O15127 329 aaKnown RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SRPX2O60687 465 aaPredicted RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 PLGP00747 810 aaPredicted RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 MAS1P04201 325 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 RPS2P15880 293 aaKnown RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 CBR1P16152 277 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 CD79BP40259 229 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 CLCN7P51798 805 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 MAP4K2Q12851 820 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 MCATQ8IVS2 390 aaKnown RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SLC22A15Q8IZD6 547 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 ZNF680Q8NEM1 530 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 FAM46AQ96IP4 442 aaKnown RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 CRB3Q9BUF7 120 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SCN10AQ9Y5Y9 1956 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 BLACEA4D250 179 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 TCRBP04435 133 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 CISD3P0C7P0 127 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 TGM1P22735 817 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 PELI3Q8N2H9 469 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 OR6N2Q8NGY6 317 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SLC25A36Q96CQ1 311 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SFXN2Q96NB2 322 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 ULBP3Q9BZM4 244 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 IFT22Q9H7X7 185 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 NAALAD2Q9Y3Q0 740 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 NUMA1Q14980 2115 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 ACOT7O00154 380 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 SSX4O60224 188 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 TPT1P13693 172 aaKnown RBP10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 PRSS3P35030 304 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 ALDH3B1P43353 468 aa10.62□□□□□ -0.71
NPC1L1-201ENST00000289547 ACTBP60709 375 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms