RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ODF4Q2M2E3 257 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 PXDC1Q5TGL8 231 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 C3orf33Q6P1S2 294 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 C4orf36Q96KX1 117 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 AMBRA1Q9C0C7 1298 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 PDE7BQ9NP56 450 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 SLC7A11Q9UPY5 501 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 DNMT3AQ9Y6K1 912 aaPredicted RBP16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 HMX2A2RU54 273 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 VSTM5A8MXK1 200 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 LAMTOR5O43504 91 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 CPEP16870 476 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 ZP3P21754 424 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 RPS26P62854 115 aaKnown RBP16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 SGCBQ16585 318 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 FAM26DQ5JW98 314 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 C12orf76Q8N812 135 aaPredicted RBP16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 CHST14Q8NCH0 376 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 LFNGQ8NES3 379 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 C1QTNF3Q9BXJ4 246 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 SYNPO2LQ9H987 977 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 A4GALTQ9NPC4 353 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 A0A0U1RQS6 177 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 H0YIV9 168 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 TO15178 435 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 SLC16A8O95907 504 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 CRABP1P29762 137 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 RPS19P39019 145 aaKnown RBP16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 LTBQ06643 244 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 BCL2A1Q16548 175 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 CATSPEREQ5SY80 951 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 TMEM25Q86YD3 366 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 PITX2Q99697 317 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 PRTFDC1Q9NRG1 225 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 SLC7A7Q9UM01 511 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 BOLA1Q9Y3E2 137 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 CORINQ9Y5Q5 1042 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 PIAS3Q9Y6X2 628 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 GPR89AB7ZAQ6 455 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 M0R3H8 397 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 KCNK2O95069 426 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 GPR89BP0CG08 455 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 HNRNPKP61978 463 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 HTR3DQ70Z44 454 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 DNAAF1Q8NEP3 725 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 TTTY10Q9BZA0 68 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 SEC61A2Q9H9S3 476 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 RREB1Q92766 1687 aa16.4■□□□□ 0.22
PCDHA13-201ENST00000289272 CITO14578 2027 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 SMAD6O43541 496 aaKnown RBP16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 PPP1R3DO95685 299 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 GASTP01350 101 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 SNRNP70P08621 437 aaKnown RBP16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 RGRP47804 291 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 MRPL19P49406 292 aaKnown RBP16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 NR0B1P51843 470 aaKnown RBP16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 TP53I3Q53FA7 332 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 TMEM244Q5VVB8 128 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 SIAH3Q8IW03 269 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 OR1M1Q8NGA1 313 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 KCNK12Q9HB15 430 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 MCCC2Q9HCC0 563 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 KLRF1Q9NZS2 232 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 GPR34Q9UPC5 381 aa16.39■□□□□ 0.22
PCDHA13-201ENST00000289272 TP53I11O14683 189 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 ATP1B1P05026 303 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 PAPD4Q6PIY7 484 aaKnown RBP16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 WDR88Q6ZMY6 472 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 OR4K13Q8NH42 304 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 PRELID3BQ9Y3B1 194 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 A6NIZ1 184 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 OR2T7P0C7T2 308 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 RAP1BP61224 184 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 RAP1AP62834 184 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 FAM189BP81408 668 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 SLC7A9P82251 487 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 CTU2Q2VPK5 515 aaKnown RBP16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 ZBTB37Q5TC79 503 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 MLIPQ5VWP3 458 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 DLEU7Q6UYE1 221 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 OR52I1Q8NGK6 324 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 OR2T27Q8NH04 317 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 TGM7Q96PF1 710 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 OR5M11Q96RB7 305 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 OR52D1Q9H346 318 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 CD207Q9UJ71 328 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 UBE2J1Q9Y385 318 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 SPI1P17947 270 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 POU3F3P20264 500 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 PLGLB1Q02325 96 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 RPS26P11Q5JNZ5 115 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 TBPL2Q6SJ96 375 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 ENY2Q9NPA8 101 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 MARF1Q9Y4F3 1742 aaKnown RBP16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 HHLA1C9JL84 531 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 FADS1O60427 444 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 HLA-AP01891 365 aaKnown RBP16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 HEXBP07686 556 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 ECI1P42126 302 aa16.39■□□□□ 0.21
PCDHA13-201ENST00000289272 CLRN1P58418 232 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms