RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 DCST2Q5T1A1 773 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF322Q6U7Q0 402 aaPredicted RBP15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 DIO2Q92813 273 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 DCLRE1CQ96SD1 692 aaKnown RBP15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF587Q96SQ5 575 aaPredicted RBP15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 STARD5Q9NSY2 213 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 TCRBV5S1A1TA0A578 114 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 FAM227AF5H4B4 570 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 H3BML4 177 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 TMX2-CTNND1H3BSU7 103 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 S100A8P05109 93 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 CDK2P24941 298 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 RUNX3Q13761 415 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 TSSK4Q6SA08 328 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 FCRLAQ7L513 359 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 PELI3Q8N2H9 469 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 LKAAEAR1Q8TD35 194 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 TMEM174Q8WUU8 243 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 UBE2FQ969M7 185 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 TEX37Q96LM6 180 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 VRK1Q99986 396 aaPredicted RBP15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 RHBDD3Q9Y3P4 386 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 MN1Q10571 1320 aaPredicted RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 LTBP3Q9NS15 1303 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 RDH16O75452 317 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 PSMB1P20618 241 aaKnown RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 TLE3Q04726 772 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 EXOSC7Q15024 291 aaKnown RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 TBPL2Q6SJ96 375 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 LYPD4Q6UWN0 246 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 PGBD5Q8N414 524 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 OR7D2Q96RA2 312 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 KLF16Q9BXK1 252 aaPredicted RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 RPS10-NUDT3A0A1W2PQS6 291 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 SNRPBP14678 240 aaKnown RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 RPS10P46783 165 aaKnown RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 CCINQ13939 588 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 A6NLC8 198 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 FASLGP48023 281 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 PER3P56645 1201 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 RRNAD1Q96FB5 475 aaKnown RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 MED20Q9H944 212 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 TXNL4BQ9NX01 149 aaKnown RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF705GA8MUZ8 300 aaPredicted RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 I6L893 689 aaPredicted RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 SGK494L7N484 410 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 TNFSF12O43508 249 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 FZD7O75084 574 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 APBB3O95704 486 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 ADRB1P08588 477 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 IDH3GP51553 393 aaPredicted RBP15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 AQP6Q13520 282 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 PLK5Q496M5 336 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 ZBTB8AQ96BR9 441 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 CRB3Q9BUF7 120 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 CXCL16Q9H2A7 254 aa15.4■□□□□ 0.06
SH3RF1-201ENST00000284637 SYNGR4O95473 234 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 C1orf105O95561 183 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 MAOBP27338 520 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 IL17RDQ8NFM7 739 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 BMFQ96LC9 184 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 NKX6-2Q9C056 277 aaPredicted RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 ABRACLQ9P1F3 81 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 LRFN1Q9P244 771 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 COL14A1Q05707 1796 aaKnown RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 SERPINA5P05154 406 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF43P17038 809 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 DLX2Q07687 328 aaPredicted RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 SFXN2Q96NB2 322 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 INTS14Q96SY0 518 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 SMIM3Q9BZL3 60 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 HCFC1R1Q9NWW0 138 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 KCNK5O95279 499 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 GABRA5P31644 462 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 CLDN12P56749 244 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 PSPHP78330 225 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 BATFQ16520 125 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 FXNQ16595 210 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 C17orf107Q6ZR85 190 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 BCDIN3DQ7Z5W3 292 aaKnown RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 TMEM151BQ8IW70 566 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 A0A0A6YYC8 382 aaPredicted RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 ZBTB42B2RXF5 422 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 I3L1I5 382 aaPredicted RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 DVL2O14641 736 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC10A3P09131 477 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 IFNGR1P15260 489 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF704Q6ZNC4 412 aaPredicted RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 FAM83HQ6ZRV2 1179 aaPredicted RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 PARS2Q7L3T8 475 aaKnown RBP15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC38A5Q8WUX1 472 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 NUDT8Q8WV74 236 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 DZANK1Q9NVP4 752 aa15.39■□□□□ 0.05
SH3RF1-201ENST00000284637 BRINP1O60477 761 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 RAB6AP20340 208 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 HIST1H1TP22492 207 aaPredicted RBP15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 PTBP1P26599 531 aaKnown RBP eCLIP15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 THBS2P35442 1172 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 PRAMEF8Q5VWM4 474 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms