RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 C8orf33Q9H7E9 229 aaPredicted RBP23.09■■□□□ 1.29
ROM1-201ENST00000278833 ERVMER34-1Q9H9K5 563 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 MCCC2Q9HCC0 563 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 ZC3H12DA2A288 527 aaKnown RBP23.09■■□□□ 1.29
ROM1-201ENST00000278833 PRAMEF26H0Y7S4 382 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 CHRNB1P11230 501 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 ELK1P19419 428 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 CCR5P51681 352 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 CRMP1Q14194 572 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 ZNHIT3Q15649 155 aaPredicted RBP23.09■■□□□ 1.29
ROM1-201ENST00000278833 PAMR1Q6UXH9 720 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 TMEM92Q6UXU6 159 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 Q8N9G6 341 aaPredicted RBP23.09■■□□□ 1.29
ROM1-201ENST00000278833 NACC2Q96BF6 587 aa23.09■■□□□ 1.29
ROM1-201ENST00000278833 A0A0G2JK05 382 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 TTC36A6NLP5 189 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 IGLV3-19P01714 112 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 NRG3P56975 720 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 KLHL12Q53G59 568 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 OAFQ86UD1 273 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 SLC22A18ASQ8N1D0 253 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 SYS1Q8N2H4 156 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 POMGNT2Q8NAT1 580 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 OIT3Q8WWZ8 545 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 SMPDL3BQ92485 455 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 VSTM2LQ96N03 204 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 USP36Q9P275 1121 aaKnown RBP23.08■■□□□ 1.29
ROM1-201ENST00000278833 CHRNA9Q9UGM1 479 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 ICAM5Q9UMF0 924 aa23.08■■□□□ 1.29
ROM1-201ENST00000278833 PPP1R3DO95685 299 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 SEMA4FO95754 770 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 NPR2P20594 1047 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 PTNP21246 168 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 EMDP50402 254 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 VSX2P58304 361 aaPredicted RBP23.07■■□□□ 1.28
ROM1-201ENST00000278833 ISXQ2M1V0 245 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 PRTGQ2VWP7 1150 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 B3GLCTQ6Y288 498 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 NOXA1Q86UR1 476 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 OR13H1Q8NG92 308 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 PATE1Q8WXA2 126 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 CCNL2Q96S94 520 aaPredicted RBP23.07■■□□□ 1.28
ROM1-201ENST00000278833 CCDC3Q9BQI4 270 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 SLC2A4RGQ9NR83 387 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 EXTL2Q9UBQ6 330 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 NUFIP1Q9UHK0 495 aaKnown RBP23.07■■□□□ 1.28
ROM1-201ENST00000278833 NPFFR2Q9Y5X5 522 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 TRAV27A0A087WT01 109 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 TRAV1-2A0A0B4J238 106 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 NOS3P29474 1203 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 SKP1P63208 163 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 TATDN3Q17R31 274 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 SFXN4Q6P4A7 337 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 DGAT2L6Q6ZPD8 337 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 ABHD4Q8TB40 342 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 COL25A1Q9BXS0 654 aaPredicted RBP23.07■■□□□ 1.28
ROM1-201ENST00000278833 ST6GALNAC2Q9UJ37 374 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 PIAS3Q9Y6X2 628 aa23.07■■□□□ 1.28
ROM1-201ENST00000278833 F5P12259 2224 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 EFCAB7A8K855 629 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 FAM25AB3EWG3 89 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 FAM25CB3EWG5 89 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 FAM25GB3EWG6 89 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 DVL2O14641 736 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 OGG1O15527 345 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 OR10H2O60403 315 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 RDH16O75452 317 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 REM1O75628 298 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 SERPINA3P01011 423 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 CSF2P04141 144 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 GABRG2P18507 467 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 RCVRNP35243 200 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 RPS7P62081 194 aaKnown RBP23.06■■□□□ 1.28
ROM1-201ENST00000278833 BTG1P62324 171 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 FAAH2Q6GMR7 532 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 ULK3Q6PHR2 472 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 ARL9Q6T311 187 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 ASCC1Q8N9N2 400 aaKnown RBP23.06■■□□□ 1.28
ROM1-201ENST00000278833 TRIM63Q969Q1 353 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 CREB3L1Q96BA8 519 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 C4orf36Q96KX1 117 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 ZNF578Q96N58 590 aaPredicted RBP23.06■■□□□ 1.28
ROM1-201ENST00000278833 ZCCHC4Q9H5U6 513 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 SLA2Q9H6Q3 261 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 MMP17Q9ULZ9 603 aa23.06■■□□□ 1.28
ROM1-201ENST00000278833 FAM240BA0A1B0GVZ2 78 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 FOXS1O43638 330 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 IGF2P01344 180 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 NGFRP08138 427 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 SHC1P29353 583 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 TALDO1P37837 337 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 GPR143P51810 404 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 ACTA2P62736 377 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 ACTG2P63267 376 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 MRPS15P82914 257 aaKnown RBP23.05■■□□□ 1.28
ROM1-201ENST00000278833 EIF2B5Q13144 721 aaKnown RBP23.05■■□□□ 1.28
ROM1-201ENST00000278833 ALG10BQ5I7T1 473 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 IDNKQ5T6J7 187 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 UBALD2Q8IYN6 164 aa23.05■■□□□ 1.28
ROM1-201ENST00000278833 SHISA5Q8N114 240 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms