RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 IL23RQ5VWK5 629 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 HMGN2P46Q86SG4 172 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 DDIASQ8IXT1 998 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 CLECL1Q8IZS7 167 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 ZNF433Q8N7K0 673 aaPredicted RBP7.89□□□□□ -1.15
TPM3-201ENST00000271850 CCDC63Q8NA47 563 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 FAM71CQ8NEG0 241 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 OR5W2Q8NH69 310 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 RFWD2Q8NHY2 731 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 OR5P2Q8WZ92 322 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 HSD17B8Q92506 261 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 HTRA1Q92743 480 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 ZG16BQ96DA0 208 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 DNAJA3Q96EY1 480 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 APOPT1Q96IL0 206 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 MRGPRX4Q96LA9 322 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 TRMOQ9BU70 441 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 HDHD5Q9BXW7 423 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 STOML1Q9UBI4 398 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 B3GALT5Q9Y2C3 310 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 IGKV3D-15A0A087WSY6 115 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 UQCRHLA0A096LP55 91 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 A0A1W2PP18 115 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 A0A1W2PR80 420 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 SERINC4A6NH21 518 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 CLDN24A6NM45 220 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 ZNF724A8MTY0 619 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 PDLIM1O00151 329 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 ZNF264O43296 627 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 SKAP2O75563 359 aaPredicted RBP7.88□□□□□ -1.15
TPM3-201ENST00000271850 HSPA4LO95757 839 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 NUDT14O95848 222 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 IGHV3-9P01782 118 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 FESP07332 822 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 PABPC4LP0CB38 370 aaKnown RBP7.88□□□□□ -1.15
TPM3-201ENST00000271850 G6PDP11413 515 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 UBL4AP11441 157 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 PGM1P36871 562 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 HPCAL1P37235 193 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 DIO1P49895 249 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 CDH11P55287 796 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 SESN3P58005 492 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 RASGEF1BQ0VAM2 473 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 PPA1Q15181 289 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 STK11Q15831 433 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 ZNF141Q15928 474 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 GTF2IRD2BQ6EKJ0 949 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 R3HCC1LQ7Z5L2 792 aaKnown RBP7.88□□□□□ -1.15
TPM3-201ENST00000271850 GTF2IRD2Q86UP8 949 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 HIPK1Q86Z02 1210 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 ZNF614Q8N883 585 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 OR10H5Q8NGA6 315 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 OR56A1Q8NGH5 318 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 SFXN5Q8TD22 340 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 ADAMTS15Q8TE58 950 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 UBLCP1Q8WVY7 318 aaPredicted RBP7.88□□□□□ -1.15
TPM3-201ENST00000271850 CHMP6Q96FZ7 201 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 ARL5BQ96KC2 179 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 THUMPD3Q9BV44 507 aaKnown RBP7.88□□□□□ -1.15
TPM3-201ENST00000271850 CCDC106Q9BWC9 280 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 NMUR2Q9GZQ4 415 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 ZNF350Q9GZX5 532 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 LAT2Q9GZY6 243 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 ESRP2Q9H6T0 727 aaKnown RBP7.88□□□□□ -1.15
TPM3-201ENST00000271850 CISD1Q9NZ45 108 aaKnown RBP7.88□□□□□ -1.15
TPM3-201ENST00000271850 KLHL9Q9P2J3 617 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 MKLN1Q9UL63 735 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 SLC25A15Q9Y619 301 aa7.88□□□□□ -1.15
TPM3-201ENST00000271850 OR5H1A6NKK0 313 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 GJE1A6NN92 205 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 ABCD4O14678 606 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 ITM2AO43736 263 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 KIAA0513O60268 411 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 EIF4E2O60573 245 aaKnown RBP7.87□□□□□ -1.15
TPM3-201ENST00000271850 SPAG7O75391 227 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 LYPLA1O75608 230 aaPredicted RBP7.87□□□□□ -1.15
TPM3-201ENST00000271850 RAD51DO75771 328 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 ITGA5P08648 1049 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 ATP6V1C1P21283 382 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 IDUAP35475 653 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 ETV4P43268 484 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 CCR4P51679 360 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 GPR68Q15743 365 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 ETFDHQ16134 617 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 SYT14P1Q58G82 188 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 TIMM23BQ5SRD1 257 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 C6orf52Q5T4I8 152 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 AP1ARQ63HQ0 302 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 OR4F3Q6IEY1 312 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 TYW3Q6IPR3 259 aaKnown RBP7.87□□□□□ -1.15
TPM3-201ENST00000271850 HMBOX1Q6NT76 420 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 C3orf33Q6P1S2 294 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 FRRS1Q6ZNA5 592 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 TMPPEQ6ZT21 453 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 SLC43A2Q8N370 569 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 TMCO5AQ8N6Q1 288 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 WDR31Q8NA23 367 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 TCP10LQ8TDR4 215 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 TRMT61AQ96FX7 289 aaKnown RBP7.87□□□□□ -1.15
TPM3-201ENST00000271850 PPP3R2Q96LZ3 170 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms