RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 IQCMA0A1B0GVH7 501 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TCRBV16S1A1N1A0A5B0 115 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OR2A25A4D2G3 310 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PATE3B3GLJ2 98 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TFPIP10646 304 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TNFRSF4P43489 277 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GAS6Q14393 721 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 AANATQ16613 207 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ABHD13Q7L211 337 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PRICKLE2Q7Z3G6 844 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CDK20Q8IZL9 346 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SLC35A4Q96G79 324 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GHITMQ9H3K2 345 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ENOPH1Q9UHY7 261 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 VDAC3Q9Y277 283 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 M0R233 179 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TO15178 435 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CBR1P16152 277 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNF10P21506 573 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TEKQ02763 1124 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GFOD2Q3B7J2 385 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ENTPD8Q5MY95 495 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 XKRXQ6PP77 449 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OR52E4Q8NGH9 312 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ELP4Q96EB1 424 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DGAT2Q96PD7 388 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 IER2Q9BTL4 223 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 AICDAQ9GZX7 198 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 COPS3Q9UNS2 423 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PCDHGA6Q9Y5G7 932 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TRBV23-1A0A0A0MS06 115 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TTLL8A6PVC2 850 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 J3QLW9 94 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 UBXN7O94888 489 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ARAFP10398 606 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ANXA8P13928 327 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNF19P17023 458 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MMP11P24347 488 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PCGF2P35227 344 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FCN2Q15485 313 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MRPL2Q5T653 305 aaKnown RBP13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 IL20RBQ6UXL0 311 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CPOQ8IVL8 374 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 Q8N402 240 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OR2L8Q8NGY9 312 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C2CD4CQ8TF44 421 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CRELD1Q96HD1 420 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TMEM80Q96HE8 168 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SLC6A15Q9H2J7 730 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 KIR3DX1Q9H7L2 352 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PRTFDC1Q9NRG1 225 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OBP2AQ9NY56 170 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FBXL4Q9UKA2 621 aa13.11□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PRAMEF27A3QJZ7 478 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FOXE1O00358 373 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CASKO14936 926 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 EMC8O43402 210 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 HCRTR2O43614 444 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RGS11O94810 467 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DHFRP00374 187 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 F13BP05160 661 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 REEP5Q00765 189 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MAPK14Q16539 360 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LYPD4Q6UWN0 246 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DGAT2L6Q6ZPD8 337 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LINC00518Q8N0U6 118 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CNOT9Q92600 299 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PRDM7Q9NQW5 492 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SEMA4GQ9NTN9 838 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SLC17A4Q9Y2C5 497 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MAB21L2Q9Y586 359 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PCDHGB2Q9Y5G2 931 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CHD8Q9HCK8 2581 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FFAR1O14842 300 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 HRO43593 1189 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PRKYO43930 277 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NDUFS6O75380 124 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GATBO75879 557 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CSTF2P33240 577 aaKnown RBP eCLIP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TRHRP34981 398 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RGS6P49758 472 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NR0B1P51843 470 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DMWDQ09019 674 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TDGQ13569 410 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C1DQ13901 141 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZFP82Q8N141 532 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GDPD1Q8N9F7 314 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZMYND19Q96E35 227 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LINC00615Q96LM1 132 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNF285Q96NJ3 590 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SECISBP2Q96T21 854 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CMAHPQ9Y471 501 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms