RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 MFSD13AQ14CX5 517 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 TRAM1Q15629 374 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 CEBPEQ15744 281 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 LINGO2Q7L985 606 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 SERPINA12Q8IW75 414 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 ETFBKMTQ8IXQ9 262 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 OR56B4Q8NH76 319 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 ZCCHC10Q8TBK6 192 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 HHIPL1Q96JK4 782 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 DDOQ99489 341 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 PDCD1LG2Q9BQ51 273 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 WDR26Q9H7D7 661 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 MEPEQ9NQ76 525 aaPredicted RBP25.41■■□□□ 1.66
CBX4-201ENST00000269397 A0A1B0GVI7 797 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 RCBTB2O95199 551 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 NAA10P41227 235 aaPredicted RBP25.41■■□□□ 1.66
CBX4-201ENST00000269397 VEGFCP49767 419 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 CLLU1Q5K131 121 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 FIGNL1Q6PIW4 674 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 MS4A15Q8N5U1 240 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 PTTG3PQ9NZH4 202 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 KCMF1Q9P0J7 381 aa25.41■■□□□ 1.66
CBX4-201ENST00000269397 LAMP2P13473 410 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 BLVRAP53004 296 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 TAS2R43P59537 309 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 ARHGAP11BQ3KRB8 267 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 TOR1AIP2Q8NFQ8 470 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 C1QTNF7Q9BXJ2 289 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 CAPN10Q9HC96 672 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 INPP5EQ9NRR6 644 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 SLC35A3Q9Y2D2 325 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 OR5K3A6NET4 321 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 CDK2AP1O14519 115 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 BMP8BP34820 402 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 MAGEB1P43366 347 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 GDI2P50395 445 aaKnown RBP25.4■■□□□ 1.66
CBX4-201ENST00000269397 BMP8AQ7Z5Y6 402 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 CMTM4Q8IZR5 234 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 LSMEM1Q8N8F7 131 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 SUSD6Q92537 303 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 LYPD3O95274 346 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 LINC00271P0C7V0 271 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 SLC2A5P22732 501 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 LCN1P31025 176 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 TSPAN5P62079 268 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 DUSP8Q13202 625 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 TMEFF1Q8IYR6 380 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 GALNT11Q8NCW6 608 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 OR11G2Q8NGC1 345 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 TNFRSF13CQ96RJ3 184 aa25.4■■□□□ 1.66
CBX4-201ENST00000269397 TP53BP1Q12888 1972 aaPredicted RBP25.39■■□□□ 1.66
CBX4-201ENST00000269397 TBC1D3KA0A087X1G2 549 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 TBC1D3BA6NDS4 549 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 TBC1D3FA6NER0 549 aaPredicted RBP25.39■■□□□ 1.66
CBX4-201ENST00000269397 M0R233 179 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 RNGTTO60942 597 aaKnown RBP25.39■■□□□ 1.66
CBX4-201ENST00000269397 PTHLHP12272 177 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 CD53P19397 219 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 HES5Q5TA89 166 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 GARNL3Q5VVW2 1013 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 TBC1D3GQ6DHY5 549 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 FAAP20Q6NZ36 180 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 FGD2Q7Z6J4 655 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 CDK20Q8IZL9 346 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 RPS6KB2Q9UBS0 482 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 CAMK2AQ9UQM7 478 aa25.39■■□□□ 1.66
CBX4-201ENST00000269397 MRPS23Q9Y3D9 190 aaKnown RBP25.39■■□□□ 1.66
CBX4-201ENST00000269397 TFP02787 698 aa25.39■■□□□ 1.65
CBX4-201ENST00000269397 PSMB10P40306 273 aa25.39■■□□□ 1.65
CBX4-201ENST00000269397 RAB14P61106 215 aa25.39■■□□□ 1.65
CBX4-201ENST00000269397 IRF4Q15306 451 aa25.39■■□□□ 1.65
CBX4-201ENST00000269397 TBX21Q9UL17 535 aa25.39■■□□□ 1.65
CBX4-201ENST00000269397 STON1Q9Y6Q2 735 aa25.39■■□□□ 1.65
CBX4-201ENST00000269397 PRICKLE3O43900 615 aaPredicted RBP25.38■■□□□ 1.65
CBX4-201ENST00000269397 PEX14O75381 377 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 FGF19O95750 216 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 DEFB134Q4QY38 66 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 EIPR1Q53HC9 387 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 SLC22A10Q63ZE4 541 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 SMIM4Q8WVI0 70 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 PELI1Q96FA3 418 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 SEC22CQ9BRL7 303 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 SLC25A18Q9H1K4 315 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 PRSS16Q9NQE7 514 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 SERGEFQ9UGK8 458 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 SPATA2Q9UM82 520 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 ATG2BQ96BY7 2078 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 ZNF860A6NHJ4 632 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 MID1O15344 667 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 ZNF3P17036 446 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 NT5EP21589 574 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 DRD3P35462 400 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 CLDN12P56749 244 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 VN1R4Q7Z5H5 301 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 ZNF614Q8N883 585 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 SRFBP1Q8NEF9 429 aaKnown RBP25.38■■□□□ 1.65
CBX4-201ENST00000269397 SDR9C7Q8NEX9 313 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 OR4E2Q8NGC2 313 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 OR2T4Q8NH00 348 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 RDH8Q9NYR8 311 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms