RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ZNF649Q9BS31 505 aa15.23■□□□□ 0.03
CCDC40-201ENST00000269318 NDUFB11Q9NX14 153 aa15.23■□□□□ 0.03
CCDC40-201ENST00000269318 HEATR5AQ86XA9 2040 aa15.23■□□□□ 0.03
CCDC40-201ENST00000269318 IGKV1D-42A0A075B6H8 117 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 J3QRE1 110 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 GPX5O75715 221 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 IGHA1P01876 353 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 MST1P26927 711 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 WNT4P56705 351 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 CLPPQ16740 277 aaPredicted RBP15.22■□□□□ 0.03
CCDC40-201ENST00000269318 RTL4Q6ZR62 310 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 ANKRD37Q7Z713 158 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 ADCK1Q86TW2 530 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 KBTBD8Q8NFY9 601 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 ZNF524Q96C55 264 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 SGTBQ96EQ0 304 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 HSPBAP1Q96EW2 488 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 JAM3Q9BX67 310 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 HCAR1Q9BXC0 346 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 SLC19A3Q9BZV2 496 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 FBXO8Q9NRD0 319 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 BAIAP2Q9UQB8 552 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 CORINQ9Y5Q5 1042 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 DMDP11532 3685 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 IGHV3-20A0A0C4DH32 117 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 FAM86C2PA6NEL3 165 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 IDSB3KWA1 339 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 IL12BP29460 328 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 SLC1A3P43003 542 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 RPS3AP61247 264 aaKnown RBP15.22■□□□□ 0.03
CCDC40-201ENST00000269318 DCDP81605 110 aaKnown RBP15.22■□□□□ 0.03
CCDC40-201ENST00000269318 PLCXD2Q0VAA5 305 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 OR2G6Q5TZ20 316 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 ATG4DQ86TL0 474 aaPredicted RBP15.22■□□□□ 0.03
CCDC40-201ENST00000269318 PHC2Q8IXK0 858 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 DTWD2Q8NBA8 298 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 OR6Q1Q8NGQ2 317 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 TM9SF4Q92544 642 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 PTP4A1Q93096 173 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 OMA1Q96E52 524 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 MESP1Q9BRJ9 268 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 SEMA4CQ9C0C4 833 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 LAT2Q9GZY6 243 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 APMAPQ9HDC9 416 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 AKIP1Q9NQ31 210 aa15.22■□□□□ 0.03
CCDC40-201ENST00000269318 VPS13AQ96RL7 3174 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 A0A1W2PQD3 144 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 VSTM2BA6NLU5 285 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 GTPBP1O00178 669 aaKnown RBP15.21■□□□□ 0.03
CCDC40-201ENST00000269318 NTN3O00634 580 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-201ENST00000269318 PPP1R3DO95685 299 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 PEPDP12955 493 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 CPEP16870 476 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 ABCD3P28288 659 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 SLC6A6P31641 620 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 CRYBB2P43320 205 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 DAB2P98082 770 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC40-201ENST00000269318 ANKDD1AQ495B1 522 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 OVCH1Q7RTY7 1134 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 PPP1R3BQ86XI6 285 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 NFAM1Q8NET5 270 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-201ENST00000269318 KISS1RQ969F8 398 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-201ENST00000269318 GFM1Q96RP9 751 aaKnown RBP15.21■□□□□ 0.03
CCDC40-201ENST00000269318 KLHDC3Q9BQ90 382 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 MED20Q9H944 212 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 ISYNA1Q9NPH2 558 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 OCIAD1Q9NX40 245 aa15.21■□□□□ 0.03
CCDC40-201ENST00000269318 CHCHD3Q9NX63 227 aaKnown RBP15.21■□□□□ 0.03
CCDC40-201ENST00000269318 H2AFY2Q9P0M6 372 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-201ENST00000269318 METTL15A6NJ78 407 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 ALG1L2C9J202 215 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 LRRN3E7EW58 273 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 PPM1BO75688 479 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 IGF2P01344 180 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 HEXBP07686 556 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 PNMTP11086 282 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 CD79BP40259 229 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 SLC9A3P48764 834 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 PNLIPRP2P54317 469 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 PHF19Q5T6S3 580 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 GDPGP1Q6ZNW5 385 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 MEPCEQ7L2J0 689 aaKnown RBP15.2■□□□□ 0.02
CCDC40-201ENST00000269318 SIRT6Q8N6T7 355 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 LRRC17Q8N6Y2 441 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 APCDD1LQ8NCL9 501 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 DTNBP1Q96EV8 351 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 SEC14L4Q9UDX3 406 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 PPIEQ9UNP9 301 aaKnown RBP15.2■□□□□ 0.02
CCDC40-201ENST00000269318 TMEM221A6NGB7 291 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 SAGE2PA6NJ88 616 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 D6RAR5 112 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 M0R296 226 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 WWP2O00308 870 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 ALOX12BO75342 701 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 IDUAP35475 653 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 CCR4P51679 360 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF117Q03924 483 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 ITGADQ13349 1161 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 LIPKQ5VXJ0 399 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms