RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SNX4O95219 450 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 GASTP01350 101 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 OPN1LWP04000 364 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 PRKCAP17252 672 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 IL11P20809 199 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 MSX1P28360 303 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 GCKP35557 465 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 SLC1A3P43003 542 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 SLC6A8P48029 635 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 TNFSF10P50591 281 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 UGT2B15P54855 530 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 SMIM11AP58511 58 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 IL1RL1Q01638 556 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 FOXO1Q12778 655 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 MERTKQ12866 999 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 ZNF766Q5HY98 468 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 ULK3Q6PHR2 472 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 IGFL2Q6UWQ7 119 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 ZNF730Q6ZMV8 503 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 GALNT5Q7Z7M9 940 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 ATG4DQ86TL0 474 aaPredicted RBP8.83□□□□□ -1
SNRNP40-201ENST00000263694 SVOPLQ8N434 492 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 OR10G2Q8NGC3 310 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 OR4K5Q8NGD3 323 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 POC1BQ8TC44 478 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 SLC38A4Q969I6 547 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 GTPBP3Q969Y2 492 aaKnown RBP8.83□□□□□ -1
SNRNP40-201ENST00000263694 TMEM41AQ96HV5 264 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 UBL7Q96S82 380 aaPredicted RBP8.83□□□□□ -1
SNRNP40-201ENST00000263694 GPA33Q99795 319 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 NIPSNAP1Q9BPW8 284 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 C9orf16Q9BUW7 83 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 OSGIN1Q9UJX0 560 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 ZNF407Q9C0G0 2248 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 DSPP15924 2871 aaKnown RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 A0A087WV48 116 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 C7orf72A4D263 438 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ELOA3DA6NLF2 546 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 FAM166BA8MTA8 275 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 FAAHO00519 579 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 CHP2O43745 196 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 NME2P1O60361 137 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZIC3O60481 467 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 RASAL1O95294 804 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 CD46P15529 392 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 FUT1P19526 365 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 NME2P22392 152 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 DPP4P27487 766 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 IFNA8P32881 189 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 VHLP40337 213 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 MEOX1P50221 254 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZNF41P51814 821 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 ARHGDIAP52565 204 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 AQP4P55087 323 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 PMP22Q01453 160 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 FOXF1Q12946 379 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 TOMM20Q15388 145 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 PLPPR5Q32ZL2 321 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZIK1Q3SY52 487 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 ELOA3BQ3SY89 546 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZNF770Q6IQ21 691 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 PPP4R4Q6NUP7 873 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 IZUMO2Q6UXV1 221 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 LINC00114Q6XXX2 140 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZER1Q7Z7L7 766 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 YRDCQ86U90 279 aaKnown RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 ADGRG3Q86Y34 549 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 HIPK1Q86Z02 1210 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 NRMQ8IXM6 262 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 AQP11Q8NBQ7 271 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ATP6V1C2Q8NEY4 427 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ELOA3Q8NG57 546 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 NR4A3Q92570 626 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 C1GALT1C1Q96EU7 318 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 FAM46AQ96IP4 442 aaKnown RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZNF597Q96LX8 424 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 C5orf34Q96MH7 638 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 FAM173AQ9BQD7 235 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 OSBPL10Q9BXB5 764 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 POLR2J2Q9GZM3 115 aaKnown RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 RNF32Q9H0A6 362 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 POLR2J3Q9H1A7 115 aaKnown RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 MEPEQ9NQ76 525 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 C20orf141Q9NUB4 165 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 TMEFF2Q9UIK5 374 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 DNAJC13O75165 2243 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 IGKV1D-42A0A075B6H8 117 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 A0A087WUJ7 227 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 TMED7-TICAM2A0A0A6YYA0 188 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 TMEM72A0PK05 275 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ZC3H12DA2A288 527 aaKnown RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 LRRN3E7EW58 273 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 DLGAP1O14490 977 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 CBR3O75828 277 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 ALPLP05186 524 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 IGFBP1P08833 259 aaPredicted RBP8.82□□□□□ -1
SNRNP40-201ENST00000263694 CELA3AP09093 270 aa8.82□□□□□ -1
SNRNP40-201ENST00000263694 UQCRBP14927 111 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms