RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 B4DXG7 233 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ADAM10O14672 748 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 EFNA3P52797 238 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 SPOCK1Q08629 439 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CYB561A3Q8NBI2 242 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ANKRD30BLA7E2S9 258 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ACP2P11117 423 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 FUT1P19526 365 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CRHBPP24387 322 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CREB3L2Q70SY1 520 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 PRMT8Q9NR22 394 aaPredicted RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 VAPAQ9P0L0 249 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF443Q9Y2A4 671 aaPredicted RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 PCDHGA5Q9Y5G8 931 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 M0QZQ0 153 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CD79AP11912 226 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 BMP4P12644 408 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 HNRNPA2B1P22626 353 aaKnown RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 METTL4Q8N3J2 472 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 TMEM163Q8TC26 289 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ADAMTS14Q8WXS8 1223 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 OR6C65A6NJZ3 312 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 ARPC1BO15143 372 aaKnown RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 SIM1P81133 766 aaPredicted RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 RBMS2Q15434 407 aaKnown RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 TBCEQ15813 527 aaPredicted RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 TP53I3Q53FA7 332 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 MEX3BQ6ZN04 569 aaKnown RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CNTN4Q8IWV2 1026 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 OR56B4Q8NH76 319 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 RASD1Q9Y272 281 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 DRD1P21728 446 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 HOXA11P31270 313 aaPredicted RBP16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CLVS2Q5SYC1 327 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CASD1Q96PB1 797 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 PTTG3PQ9NZH4 202 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 NPAP1Q9NZP6 1156 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 CEP290O15078 2479 aa16.39■□□□□ 0.21
NOTCH3-201ENST00000263388 C1orf105O95561 183 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 MMP12P39900 470 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 MCTS1Q9ULC4 181 aaKnown RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 BHLHE40O14503 412 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SGCEO43556 437 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SDC1P18827 310 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SERPINF1P36955 418 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 OR7G1Q8NGA0 311 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 OR5AR1Q8NGP9 310 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 CHRDQ9H2X0 955 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SULT2B1O00204 365 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 RPS17P08708 135 aaKnown RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 RAB6AP20340 208 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 KITLGP21583 273 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 FAM189BP81408 668 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 MEPCEQ7L2J0 689 aaKnown RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 LRRC15Q8TF66 581 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 FAM71F1Q96KD3 344 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SOX4Q06945 474 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 GALEQ14376 348 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 FAM199XQ6PEV8 388 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 TMEM25Q86YD3 366 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF610Q8N9Z0 462 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 RAB39BQ96DA2 213 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 QPCTLQ9NXS2 382 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 HHLA2Q9UM44 414 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF281Q9Y2X9 895 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 TMEM212A6NML5 194 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 TMEM41BQ5BJD5 291 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 PARP16Q8N5Y8 322 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SENP5Q96HI0 755 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SLC30A3Q99726 388 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 ENKD1Q9H0I2 346 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 ZNF223Q9UK11 482 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 A0A0D9SG52 128 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SORBS2O94875 1100 aaKnown RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 GABRR1P24046 479 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 RNF4P78317 190 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 ACY1Q03154 408 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 RAB35Q15286 201 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 RFPL4BQ6ZWI9 263 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 NLGN4XQ8N0W4 816 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SDSLQ96GA7 329 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 GON7Q9BXV9 100 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SAP130Q9H0E3 1048 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 ACTR10Q9NZ32 417 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 EEF1A1P68104 462 aaKnown RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 IER5LQ5T953 404 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 FBXO27Q8NI29 283 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SMAP2Q8WU79 429 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 SLAMF9Q96A28 289 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 GJD2Q9UKL4 321 aa16.38■□□□□ 0.21
NOTCH3-201ENST00000263388 ANTXRLA6NF34 631 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 CD300LBA8K4G0 201 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 APOOLQ6UXV4 268 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 GATA6Q92908 595 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 NFKBIEO00221 500 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 GIMAP1Q8WWP7 306 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 RADILQ96JH8 1075 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 POLHQ9Y253 713 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 B4GAT1O43505 415 aa16.37■□□□□ 0.21
NOTCH3-201ENST00000263388 PTHP01270 115 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms