RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NADKO95544 446 aaPredicted RBP20.43■□□□□ 0.86
SIX3-201ENST00000260653 NUBP1P53384 320 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 ZNF91Q05481 1191 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 SLC25A30Q5SVS4 291 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 CDCP2Q5VXM1 449 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 OR2Y1Q8NGV0 311 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 C12orf43Q96C57 262 aaKnown RBP20.43■□□□□ 0.86
SIX3-201ENST00000260653 ZNF582Q96NG8 517 aaPredicted RBP20.43■□□□□ 0.86
SIX3-201ENST00000260653 PRRG3Q9BZD7 231 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 PARD6AQ9NPB6 346 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 TAS2R16Q9NYV7 291 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 AHCTF1Q8WYP5 2266 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 PRR33A8MZF0 331 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 SURF4O15260 269 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 JMJD7P0C870 316 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 PCSK6P29122 969 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 ATG4DQ86TL0 474 aaPredicted RBP20.43■□□□□ 0.86
SIX3-201ENST00000260653 OR5L2Q8NGL0 311 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 HS3ST3B1Q9Y662 390 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 COMMD3-BMI1R4GMX3 469 aa20.43■□□□□ 0.86
SIX3-201ENST00000260653 IGKV1D-42A0A075B6H8 117 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 A0A1W2PNU3 283 aaPredicted RBP20.42■□□□□ 0.86
SIX3-201ENST00000260653 LRRN3E7EW58 273 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 SLC2A10O95528 541 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 DBTP11182 482 aaKnown RBP20.42■□□□□ 0.86
SIX3-201ENST00000260653 PSMB9P28065 219 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 TOMM34Q15785 309 aaPredicted RBP20.42■□□□□ 0.86
SIX3-201ENST00000260653 BTBD16Q32M84 506 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 OAFQ86UD1 273 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 OR52L1Q8NGH7 329 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 ZNF563Q8TA94 476 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 LIN37Q96GY3 246 aaPredicted RBP20.42■□□□□ 0.86
SIX3-201ENST00000260653 ICAM5Q9UMF0 924 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 IGHV1-45A0A0A0MS14 117 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 ELOA3DA6NLF2 546 aaPredicted RBP20.42■□□□□ 0.86
SIX3-201ENST00000260653 ZFAND5O76080 213 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 BMP7P18075 431 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 TBCEQ15813 527 aaPredicted RBP20.42■□□□□ 0.86
SIX3-201ENST00000260653 ELOA3BQ3SY89 546 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 MEDAGQ5VYS4 303 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 SMARCD3Q6STE5 483 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 DHRS13Q6UX07 377 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 B3GNT6Q6ZMB0 384 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 IQCF2Q8IXL9 164 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 ELOA3Q8NG57 546 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 MYOTQ9UBF9 498 aa20.42■□□□□ 0.86
SIX3-201ENST00000260653 BHLHE40O14503 412 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 ADAM10O14672 748 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 RCBTB2O95199 551 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 CELA2AP08217 269 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 ACVR2AP27037 513 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 ITPKBP27987 946 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 FHL1Q13642 323 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 SYT6Q5T7P8 510 aaPredicted RBP20.41■□□□□ 0.86
SIX3-201ENST00000260653 ZNF420Q8TAQ5 688 aaPredicted RBP20.41■□□□□ 0.86
SIX3-201ENST00000260653 TAAR9Q96RI9 348 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 TEX12Q9BXU0 123 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 RPL36Q9Y3U8 105 aaKnown RBP20.41■□□□□ 0.86
SIX3-201ENST00000260653 H3BMQ9 156 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 ZNF701M0R085 212 aaPredicted RBP20.41■□□□□ 0.86
SIX3-201ENST00000260653 EIF4E2O60573 245 aaKnown RBP20.41■□□□□ 0.86
SIX3-201ENST00000260653 PTP4A3O75365 173 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 COX6A1P12074 109 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 PIPP12273 146 aaPredicted RBP20.41■□□□□ 0.86
SIX3-201ENST00000260653 RANBP1P43487 201 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 SLC6A8P48029 635 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 EFR3AQ14156 821 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 PLAG1Q6DJT9 500 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 TIPARPQ7Z3E1 657 aaKnown RBP20.41■□□□□ 0.86
SIX3-201ENST00000260653 LRRC17Q8N6Y2 441 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 PLEKHA8Q96JA3 519 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 COG8Q96MW5 612 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 TNFRSF13CQ96RJ3 184 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 FUNDC2Q9BWH2 189 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 PTTG2Q9NZH5 202 aa20.41■□□□□ 0.86
SIX3-201ENST00000260653 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.41■□□□□ 0.86
SIX3-201ENST00000260653 SDK2Q58EX2 2172 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 TMX2-CTNND1H3BSU7 103 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 HCN1O60741 890 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 OR2J2O76002 312 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 NUDT14O95848 222 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 MT-CO3P00414 261 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 FOLR3P41439 243 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 SLC1A3P43003 542 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 RPL13AP3Q6NVV1 102 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 ELP5Q8TE02 316 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 SGTBQ96EQ0 304 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 DOK1Q99704 481 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 ZPBPQ9BS86 351 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 MCCC2Q9HCC0 563 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 PADI1Q9ULC6 663 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 PTHP01270 115 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 PNMTP11086 282 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 IRF3Q14653 427 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 UBE2UQ5VVX9 321 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 ANKK1Q8NFD2 765 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 DUSP19Q8WTR2 217 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 IFT27Q9BW83 186 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 DEFB126Q9BYW3 111 aa20.4■□□□□ 0.86
SIX3-201ENST00000260653 C9orf172C9J069 976 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms