RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MARCH9Q86YJ5 346 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 LRRC42Q9Y546 428 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 SLC22A20A6NK97 555 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 PET100P0DJ07 73 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 RAB3AP20336 220 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 EXOSC7Q15024 291 aaKnown RBP12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 OR1C1Q15619 314 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 RAB6CQ53S08 254 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 RHBDD2Q6NTF9 364 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 DHRS4L2Q6PKH6 230 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 IL17RDQ8NFM7 739 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 DIRAS2Q96HU8 199 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 AIFM2Q9BRQ8 373 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 RAB33BQ9H082 229 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 RAB6CQ9H0N0 254 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 TBCCD1Q9NVR7 557 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 P4HTMQ9NXG6 502 aa12.46□□□□□ -0.41
PRPF38A-201ENST00000257181 C9JVG2 144 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 TRNP1Q6NT89 227 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 NIPAL3Q6P499 406 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 OR4K5Q8NGD3 323 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 ATAD5Q96QE3 1844 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 TRGV5A0A0B4J1U4 118 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 IFNGR1P15260 489 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 ETV6P41212 452 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 MC2RQ01718 297 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 ZNF92Q03936 586 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 OR1Q1Q15612 314 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 OR5J2Q8NH18 312 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 OR51A7Q8NH64 312 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 TCEAL3Q969E4 200 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 TOR3AQ9H497 397 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 ESRP2Q9H6T0 727 aaKnown RBP12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 KCMF1Q9P0J7 381 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 ZNF175Q9Y473 711 aa12.46□□□□□ -0.42
PRPF38A-201ENST00000257181 FURINP09958 794 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 FTH1P19P0C7X4 201 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 DRD5P21918 477 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 BNIP3Q12983 259 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 RUNDC3AQ59EK9 446 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 TUBA3EQ6PEY2 450 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 H1FNTQ75WM6 255 aaPredicted RBP12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC35F2Q8IXU6 374 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 DNAJC5GQ8N7S2 189 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 DUSP19Q8WTR2 217 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC35B4Q969S0 331 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 SYT3Q9BQG1 590 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 OR10A4Q9H209 315 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 ANKRD34CP0C6C1 535 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 ITGB8P26012 769 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 MCCD1P59942 119 aaPredicted RBP12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 MICAQ29983 383 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 ZNF684Q5T5D7 378 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 FAM69AQ5T7M9 428 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 MFSD12Q6NUT3 480 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 DCDC5Q6ZRR9 648 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 NRMQ8IXM6 262 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 LRRN4CLQ8ND94 238 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 STK35Q8TDR2 534 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 CA5BP1Q8WTZ4 195 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 SPACA9Q96E40 222 aaPredicted RBP12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 KCNJ16Q9NPI9 418 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 ENPP5Q9UJA9 477 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 GKN3PP0CG01 181 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 ETFAP13804 333 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 SLC35D3Q5M8T2 416 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 LINGO2Q7L985 606 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 GALNT16Q8N428 558 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 OR5D14Q8NGL3 314 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 BPIFA2Q96DR5 249 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 MED18Q9BUE0 208 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 GORASP2Q9H8Y8 452 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 SRA1Q9HD15 236 aaKnown RBP12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 ACOT13Q9NPJ3 140 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 LHX9Q9NQ69 397 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 PRAMEF27A3QJZ7 478 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 TRAPPC2LH3BP13 241 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 ACTL6AO96019 429 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 ST6GAL1P15907 406 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 LGALS4P56470 323 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 NPRL3Q12980 569 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 IDNKQ5T6J7 187 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 FAM71E1Q6IPT2 247 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 CMTM4Q8IZR5 234 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 TAS2R8Q9NYW2 309 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 PCOLCE2Q9UKZ9 415 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 COMMD3-BMI1R4GMX3 469 aa12.45□□□□□ -0.42
PRPF38A-201ENST00000257181 MASP2O00187 686 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 GABBR2O75899 941 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 LSSP48449 732 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 CLDN17P56750 224 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 CDK10Q15131 360 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 SWI5Q1ZZU3 235 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 ARHGAP11BQ3KRB8 267 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 TRIB1Q96RU8 372 aa12.44□□□□□ -0.42
PRPF38A-201ENST00000257181 ZNF587Q96SQ5 575 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms