RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 OR6Q1Q8NGQ2 317 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 SYNPO2LQ9H987 977 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 PLEKHJ1Q9NW61 149 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 TAS2R3Q9NYW6 316 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 EEF1E1-BLOC1S5C9J1V9 151 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 CTNSO60931 367 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 RAB3DO95716 219 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 CRHBPP24387 322 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 RGS6P49758 472 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 PFN3P60673 137 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 RBPJQ06330 500 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 METTL11BQ5VVY1 283 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 FAM160A2Q8N612 972 aaPredicted RBP17.68■□□□□ 0.42
PTPRE-201ENST00000254667 C7orf34Q96L11 122 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 NUBP2Q9Y5Y2 271 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 SLC43A1O75387 559 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 ALPLP05186 524 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 IRS1P35568 1242 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 SSR4P51571 173 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 METRNLQ641Q3 311 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 SLC48A1Q6P1K1 146 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 ABHD17CQ6PCB6 329 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 TPRA1Q86W33 373 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 CHTF18Q8WVB6 975 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 FGF21Q9NSA1 209 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 SPHK1Q9NYA1 384 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 REV1Q9UBZ9 1251 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 GPR160Q9UJ42 338 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 WIF1Q9Y5W5 379 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 RFXAPO00287 272 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 AP1G1O43747 822 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 NARSO43776 548 aaKnown RBP17.68■□□□□ 0.42
PTPRE-201ENST00000254667 SLC5A2P31639 672 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 RPL22L1Q6P5R6 122 aaKnown RBP17.68■□□□□ 0.42
PTPRE-201ENST00000254667 GCDHQ92947 438 aaPredicted RBP17.68■□□□□ 0.42
PTPRE-201ENST00000254667 OR51E2Q9H255 320 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 CDC14CA4D256 554 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 SC5DO75845 299 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 CXCL10P02778 98 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 NPPBP16860 134 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 ACVR1Q04771 509 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 DPTQ07507 201 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 MEF2DQ14814 521 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 SF3A2Q15428 464 aaKnown RBP17.68■□□□□ 0.42
PTPRE-201ENST00000254667 CCDC58Q4VC31 144 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 MBOAT2Q6ZWT7 520 aa17.68■□□□□ 0.42
PTPRE-201ENST00000254667 TAPBPO15533 448 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 HCRTR1O43613 425 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 PTGS2P35354 604 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 EMX1Q04741 257 aaPredicted RBP17.67■□□□□ 0.42
PTPRE-201ENST00000254667 CAMK2DQ13557 499 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 CMIPQ8IY22 773 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 SLC43A2Q8N370 569 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 CNOT9Q92600 299 aaKnown RBP17.67■□□□□ 0.42
PTPRE-201ENST00000254667 UTP4Q969X6 686 aaKnown RBP17.67■□□□□ 0.42
PTPRE-201ENST00000254667 AMDHD1Q96NU7 426 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 ZNF226Q9NYT6 803 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 LRP5O75197 1615 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 SMCO3A2RU48 225 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 METTL15A6NJ78 407 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 ACTL6BO94805 426 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 KIAA1211LQ6NV74 962 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 OR9K2Q8NGE7 335 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 GGHQ92820 318 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 ANKRD19PQ9H560 264 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 TMEM38AQ9H6F2 299 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 PRDM9Q9NQV7 894 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 TMEM269A0A1B0GVZ9 245 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 FBXO45P0C2W1 286 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 PSMB10P40306 273 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 ZNF91Q05481 1191 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 OR13H1Q8NG92 308 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 OR1J4Q8NGS1 313 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 RSC1A1Q92681 617 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 OR6C1Q96RD1 312 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 SUSD5O60279 629 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 FOXD2O60548 495 aaPredicted RBP17.67■□□□□ 0.42
PTPRE-201ENST00000254667 UPK1BO75841 260 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 IL1AP01583 271 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 IGLV3-25P01717 112 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 AKAIN1P0CW23 69 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 NPR2P20594 1047 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 TPMTP51580 245 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 GPLD1P80108 840 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 C17orf67Q0P5P2 114 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 PARM1Q6UWI2 310 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 SPRED1Q7Z699 444 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 KIAA0907Q7Z7F0 614 aaPredicted RBP17.67■□□□□ 0.42
PTPRE-201ENST00000254667 MEX3DQ86XN8 651 aaKnown RBP17.67■□□□□ 0.42
PTPRE-201ENST00000254667 MZB1Q8WU39 189 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 TMIGD2Q96BF3 282 aa17.67■□□□□ 0.42
PTPRE-201ENST00000254667 CITO14578 2027 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 ZNF736B4DX44 427 aaPredicted RBP17.66■□□□□ 0.42
PTPRE-201ENST00000254667 MEN1O00255 615 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 IGLV3-27P01718 113 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 LTB4RQ15722 352 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 SGPP2Q8IWX5 399 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 MRPL41Q8IXM3 137 aaKnown RBP17.66■□□□□ 0.42
PTPRE-201ENST00000254667 C16orf58Q96GQ5 468 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 SLC41A2Q96JW4 573 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms