RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 FAM47E-STBD1D6RA91 191 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 MAN2B1O00754 1011 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 HRGP04196 525 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 TACSTD2P09758 323 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 AP3S2P59780 193 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 CCDC58Q4VC31 144 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 BTN2A1Q7KYR7 527 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 SLITRK4Q8IW52 837 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 DNAAF1Q8NEP3 725 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 RSC1A1Q92681 617 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 A4GNTQ9UNA3 340 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 EXO1Q9UQ84 846 aaKnown RBP12.73□□□□□ -0.37
NCLN-201ENST00000246117 NOP16Q9Y3C1 178 aaKnown RBP12.73□□□□□ -0.37
NCLN-201ENST00000246117 ARPC5O15511 151 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 MRPS14O60783 128 aaKnown RBP12.73□□□□□ -0.37
NCLN-201ENST00000246117 NDUFB2O95178 105 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 UCHL1P09936 223 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 F3P13726 295 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 ELK1P19419 428 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 GABRA5P31644 462 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 ARRB1P49407 418 aaPredicted RBP12.73□□□□□ -0.37
NCLN-201ENST00000246117 BLKP51451 505 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 FOXK2Q01167 660 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 GALK2Q01415 458 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 GRM7Q14831 915 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 NLRP8Q86W28 1048 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 PAQR7Q86WK9 346 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 GPALPP1Q8IXQ4 340 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 RDH10Q8IZV5 341 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 OR2L8Q8NGY9 312 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 FAM3CQ92520 227 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 FGF14Q92915 247 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 ARL6Q9H0F7 186 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 PLEKHA1Q9HB21 404 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 PCDHGB1Q9Y5G3 927 aa12.73□□□□□ -0.37
NCLN-201ENST00000246117 GPR75O95800 540 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 PROS1P07225 676 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 CSF3P09919 207 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 KLHL24Q6TFL4 600 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 POGLUT1Q8NBL1 392 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 OR4N2Q8NGD1 307 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 TOE1Q96GM8 510 aaKnown RBP12.72□□□□□ -0.37
NCLN-201ENST00000246117 CDCA4Q9BXL8 241 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 PBX4Q9BYU1 374 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 CA14Q9ULX7 337 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SCN10AQ9Y5Y9 1956 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 HMX3A6NHT5 357 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SLC19A2O60779 497 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 GCM2O75603 506 aaPredicted RBP12.72□□□□□ -0.37
NCLN-201ENST00000246117 ERP29P30040 261 aaKnown RBP12.72□□□□□ -0.37
NCLN-201ENST00000246117 NUP62P37198 522 aaPredicted RBP12.72□□□□□ -0.37
NCLN-201ENST00000246117 PDE7AQ13946 482 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 YOD1Q5VVQ6 348 aaPredicted RBP12.72□□□□□ -0.37
NCLN-201ENST00000246117 ATCAYQ86WG3 371 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 TRMT61AQ96FX7 289 aaKnown RBP12.72□□□□□ -0.37
NCLN-201ENST00000246117 GPA33Q99795 319 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 AGAP14A8MT82 685 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 FZD7O75084 574 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 ALDOBP05062 364 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 ARSBP15848 533 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 HTR3AP46098 478 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 HNRNPFP52597 415 aaKnown RBP12.72□□□□□ -0.37
NCLN-201ENST00000246117 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 OR5H6Q8NGV6 325 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 NPRL2Q8WTW4 380 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 FCAMRQ8WWV6 532 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 Q96M85 177 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 BCL2L14Q9BZR8 327 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 PLCXD1Q9NUJ7 323 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 KLRF1Q9NZS2 232 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 CACNG2Q9Y698 323 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SELENOFO60613 162 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 TSPAN9O75954 239 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 APBB3O95704 486 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 METAP1DQ6UB28 335 aaPredicted RBP12.72□□□□□ -0.37
NCLN-201ENST00000246117 NUP54Q7Z3B4 507 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SLC35F2Q8IXU6 374 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 OR13H1Q8NG92 308 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SLC7A6Q92536 515 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 ELMOD3Q96FG2 381 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SERINC2Q96SA4 455 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SDF2Q99470 211 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 TAPBPLQ9BX59 468 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SLC38A1Q9H2H9 487 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 SLC6A20Q9NP91 592 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 FTSJ1Q9UET6 329 aa12.72□□□□□ -0.37
NCLN-201ENST00000246117 LAMA3Q16787 3333 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 PLXNA1Q9UIW2 1896 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 PAPPA2Q9BXP8 1791 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 A0A1B0GW55 424 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 C17orf105B2RV13 164 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 TRIM3O75382 744 aaPredicted RBP12.71□□□□□ -0.37
NCLN-201ENST00000246117 DUX4L2P0CJ85 424 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 DUX4L3P0CJ86 424 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 DUX4L4P0CJ87 422 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 DUX4L5P0CJ88 424 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 DUX4L6P0CJ89 424 aa12.71□□□□□ -0.37
NCLN-201ENST00000246117 DUX4L7P0CJ90 424 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms