RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MGST1P10620 155 aaKnown RBP7.05□□□□□ -1.28
RIF1-201ENST00000243326 PROX2Q3B8N5 592 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 TEX26Q8N6G2 289 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 C2orf42Q9NWW7 574 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 TMEM235A6NFC5 223 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 G3V3Y1 287 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 CLDN6P56747 220 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 TLE1Q04724 770 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 GPR176Q14439 515 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 MZB1Q8WU39 189 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 ST8SIA4Q92187 359 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 ZIC5Q96T25 663 aa7.05□□□□□ -1.28
RIF1-201ENST00000243326 PURGQ9UJV8 347 aaKnown RBP7.05□□□□□ -1.28
RIF1-201ENST00000243326 METTL15A6NJ78 407 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 DUSP11O75319 330 aaKnown RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 HLA-AP01891 365 aaKnown RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 GALTP07902 379 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 MAPK3P27361 379 aaPredicted RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 CD6P30203 668 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 OR10A3P58181 314 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 WDR5P61964 334 aaKnown RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 OR7A5Q15622 319 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 GDPD3Q7L5L3 318 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 LRRC25Q8N386 305 aaPredicted RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 OR1S1Q8NH92 325 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 RHBDF1Q96CC6 855 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 PLCXD1Q9NUJ7 323 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 A0A1W2PQU0 124 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 A6NLC8 198 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ZNF736B4DX44 427 aaPredicted RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 TNFP01375 233 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 TESK1Q15569 626 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 KIAA0319Q5VV43 1072 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 BRAT1Q6PJG6 821 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 KLHDC8AQ8IYD2 350 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ZNF583Q96ND8 569 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 SCGB3A2Q96PL1 93 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ZNF416Q9BWM5 594 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 AMBRA1Q9C0C7 1298 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ERVMER34-1Q9H9K5 563 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ATG2BQ96BY7 2078 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 A0A0A6YYJ9 748 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 F5H5K5 113 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 SELENOFO60613 162 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 EIF4EP06730 217 aaKnown RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 FUT1P19526 365 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 CCSMST1Q4G0I0 132 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 COX15Q7KZN9 410 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 DPPA4Q7L190 304 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 NIT2Q9NQR4 276 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ZNF443Q9Y2A4 671 aaPredicted RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 CACNA1HO95180 2353 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ATP5A1P25705 553 aaKnown RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 SLC22A6Q4U2R8 563 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 CSNK1A1LQ8N752 337 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 RASD2Q96D21 266 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 MAP6Q96JE9 813 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 SYT17Q9BSW7 474 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 POPDC3Q9HBV1 291 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 HEBP1Q9NRV9 189 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 EFCAB7A8K855 629 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 EDIL3O43854 480 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 DBHP09172 617 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 CCR7P32248 378 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 UGT2B10P36537 528 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 SCNN1AP37088 669 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 DHPSP49366 369 aaPredicted RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 PGGHGQ32M88 737 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 CLVS2Q5SYC1 327 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 LINC00346Q8IVM7 164 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ZBTB8AQ96BR9 441 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 CHST2Q9Y4C5 530 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 GPX5O75715 221 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 FAM163BP0C2L3 166 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 RPS18P62269 152 aaKnown RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 UGT3A2Q3SY77 523 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 SUN3Q8TAQ9 357 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 POFUT1Q9H488 388 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 DCCP43146 1447 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 B8ZZF3 427 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 RAD51DO75771 328 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 UBE2KP61086 200 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ACTC1P68032 377 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ACTA1P68133 377 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 DEFA6Q01524 100 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 CHRNEQ04844 493 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 AQP6Q13520 282 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 CPZQ66K79 652 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 LIX1LQ8IVB5 337 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 HAO2Q9NYQ3 351 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ACHEP22303 614 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 HOXC12P31275 282 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 RPE65Q16518 533 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 DCST2Q5T1A1 773 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 CPT1CQ8TCG5 803 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ATG12O94817 140 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 SMUG1Q53HV7 270 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 FAM122CQ6P4D5 195 aa7.04□□□□□ -1.28
RIF1-201ENST00000243326 ZNF704Q6ZNC4 412 aaPredicted RBP7.04□□□□□ -1.28
RIF1-201ENST00000243326 TMUB2Q71RG4 321 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms