RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ACY1Q03154 408 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 CSTF1Q05048 431 aaKnown RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 TPBGQ13641 420 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 PRPF38BQ5VTL8 546 aaKnown RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 LANCL3Q6ZV70 420 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 SIRT6Q8N6T7 355 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 OR4D9Q8NGE8 314 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 OR9Q1Q8NGQ5 310 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 OR1N1Q8NGS0 311 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 PHOSPHO1Q8TCT1 267 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 NACC2Q96BF6 587 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 ART5Q96L15 291 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 JAM3Q9BX67 310 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 TGIF2Q9GZN2 237 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 IGHV5-10-1A0A0J9YXX1 117 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 ZC3H12DA2A288 527 aaKnown RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 CDC14CA4D256 554 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 AGRPO00253 132 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 TIAF1O95411 115 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 DBPQ10586 325 aaPredicted RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 ITGADQ13349 1161 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 FCRLBQ6BAA4 426 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 Q6ZNX1 250 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 SHISA6Q6ZSJ9 500 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 RABEPKQ7Z6M1 372 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 SLC37A3Q8NCC5 494 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 KISS1RQ969F8 398 aaPredicted RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 SGTBQ96EQ0 304 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 OR6C1Q96RD1 312 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 SECISBP2Q96T21 854 aaKnown RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 GAREM1Q9H706 876 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 EXOSC3Q9NQT5 275 aaKnown RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 ERVK13-1Q9NX77 482 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 TNFRSF10DQ9UBN6 386 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 MRTO4Q9UKD2 239 aaKnown RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 BAIAP2Q9UQB8 552 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 COL5A1P20908 1838 aaPredicted RBP16.94■□□□□ 0.3
HOXC11-201ENST00000243082 TO15178 435 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 PEPDP12955 493 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 SLC43A2Q8N370 569 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 LRRC17Q8N6Y2 441 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 PSD4Q8NDX1 1056 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 OR51G2Q8NGK0 314 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 STT3BQ8TCJ2 826 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 ZNF524Q96C55 264 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 ASPNQ9BXN1 380 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 RTN4RQ9BZR6 473 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 WWTR1Q9GZV5 400 aa16.93■□□□□ 0.3
HOXC11-201ENST00000243082 SF3B6Q9Y3B4 125 aaKnown RBP16.93■□□□□ 0.3
HOXC11-201ENST00000243082 IGKV1D-42A0A075B6H8 117 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 IGLV3-12A0A075B6K2 115 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 LRRN3E7EW58 273 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 PRR23D1E9PI22 279 aaPredicted RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 ZNF264O43296 627 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 ICOSLGO75144 302 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 REM1O75628 298 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 LALBAP00709 142 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 CFIP05156 583 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 TSPAN19P0C672 248 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 PRR23D2P0DMB1 279 aaPredicted RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 SLC6A6P31641 620 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 ATP6V1E1P36543 226 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 NR0B1P51843 470 aaKnown RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 PEAR1Q5VY43 1037 aaPredicted RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 WBP2NLQ6ICG8 309 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 EID2Q8N6I1 236 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 SLC7A5P2Q9GIP4 190 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 C6orf62Q9GZU0 229 aaPredicted RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 LRRN3Q9H3W5 708 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 COPS7AQ9UBW8 275 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 SSR3Q9UNL2 185 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 hCG_2014768A0A024R1R8 64 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 CCDC182A6NF36 153 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 ZNF670-ZNF695F2Z2N8 137 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 GTPBP1O00178 669 aaKnown RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 TSPAN2O60636 221 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 ZNF12P17014 697 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 HK1P19367 917 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 NOS3P29474 1203 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 LCN1P31025 176 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 RPS19P39019 145 aaKnown RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 C11orf91Q3C1V1 193 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 HLA-DQA1Q5Y7H0 255 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 FAAH2Q6GMR7 532 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 ATG4DQ86TL0 474 aaPredicted RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 ZNF441Q8N8Z8 693 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 OR2I1PQ8NGU4 316 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 KLHDC3Q9BQ90 382 aa16.92■□□□□ 0.3
HOXC11-201ENST00000243082 YARS2Q9Y2Z4 477 aaKnown RBP16.92■□□□□ 0.3
HOXC11-201ENST00000243082 PNMA8CA0A1B0GUJ8 204 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 RIIAD1A6NNX1 92 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 LRRTM2O43300 516 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 PPM1BO75688 479 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 SULT1C4O75897 302 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 SLC2A5P22732 501 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 MST1P26927 711 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 SLC9A3P48764 834 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 SIGLEC14Q08ET2 396 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 CRMP1Q14194 572 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 KLHL12Q53G59 568 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms