RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PCED1AQ9H1Q7 454 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 LMAN1LQ9HAT1 526 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 EPHA6Q9UF33 1036 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 A0A087WUJ7 227 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 TMEM221A6NGB7 291 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 REM1O75628 298 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 CDC123O75794 336 aaPredicted RBP14.87□□□□□ -0.03
UBE3D-201ENST00000237186 PPP1R3DO95685 299 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 F8A1P23610 371 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 NOS3P29474 1203 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 ADH7P40394 386 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 CASP3P42574 277 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 EVX1P49640 407 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 ACTC1P68032 377 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 ACTA1P68133 377 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 CRYZQ08257 329 aaKnown RBP14.87□□□□□ -0.03
UBE3D-201ENST00000237186 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.87□□□□□ -0.03
UBE3D-201ENST00000237186 OGFOD3Q6PK18 319 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 UBQLNLQ8IYU4 475 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 SDR16C5Q8N3Y7 309 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 BCORP1Q8N888 145 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 ZSCAN1Q8NBB4 408 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 OR10H4Q8NGA5 316 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 OR5W2Q8NH69 310 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 LMX1AQ8TE12 382 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 ACOT12Q8WYK0 555 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 ARSGQ96EG1 525 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 NDC1Q9BTX1 674 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 OR51V1Q9H2C8 321 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 LRIT1Q9P2V4 623 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 PRODH2Q9UF12 536 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 CHRNA9Q9UGM1 479 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 ERVK-19Q9WJR5 959 aa14.87□□□□□ -0.03
UBE3D-201ENST00000237186 A0A1W2PPC1 479 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 TLCD2A6NGC4 264 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 CD8B2A6NJW9 211 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 TMCC2O75069 709 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 PPM1BO75688 479 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 NDUFB2O95178 105 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 IGF2P01344 180 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 HLA-DQB1P01920 261 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 CLPSP04118 112 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 CD8BP10966 210 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 TMED10P49755 219 aaKnown RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 RACK1P63244 317 aaKnown RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 ISXQ2M1V0 245 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 KLHL26Q53HC5 615 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 MZT2AQ6P582 158 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 SPATC1Q76KD6 591 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 GATAD2AQ86YP4 633 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 ZNF440Q8IYI8 595 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 CADM4Q8NFZ8 388 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 OR7G1Q8NGA0 311 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 OR51Q1Q8NH59 317 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 EFHD2Q96C19 240 aaPredicted RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 MMABQ96EY8 250 aaPredicted RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 RNF32Q9H0A6 362 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 MKKSQ9NPJ1 570 aaPredicted RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 COMMD3Q9UBI1 195 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 RPS6KB2Q9UBS0 482 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 TMEM184BQ9Y519 407 aaPredicted RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 CSTAP01040 98 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 MAOAP21397 527 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 AZGP1P25311 298 aaKnown RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 MLLT3P42568 568 aaPredicted RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 HTR3AP46098 478 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 OR2B6P58173 313 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 RPS7P62081 194 aaKnown RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 ZNF85Q03923 595 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 TDGQ13569 410 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 INSL4Q14641 139 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 LSRQ86X29 649 aaPredicted RBP14.86□□□□□ -0.03
UBE3D-201ENST00000237186 FAM71CQ8NEG0 241 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 OR4C3Q8NH37 302 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 SMPDL3BQ92485 455 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 SGTBQ96EQ0 304 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 TPSD1Q9BZJ3 242 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 SLC19A3Q9BZV2 496 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 PDE7BQ9NP56 450 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 KLHL21Q9UJP4 597 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 ZMIZ1Q9ULJ6 1067 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 NOX1Q9Y5S8 564 aa14.86□□□□□ -0.03
UBE3D-201ENST00000237186 IGHV5-51A0A0C4DH38 117 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 C2orf92A0A1B0GVN3 265 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 SOX1O00570 391 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-201ENST00000237186 SC5DO75845 299 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 CLUP10909 449 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 RPS5P46782 204 aaKnown RBP14.85□□□□□ -0.03
UBE3D-201ENST00000237186 SMAD2Q15796 467 aaKnown RBP14.85□□□□□ -0.03
UBE3D-201ENST00000237186 CNIH2Q6PI25 160 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 CADM2Q8N3J6 435 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 SENP5Q96HI0 755 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-201ENST00000237186 NEDD4LQ96PU5 975 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 UBL7Q96S82 380 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-201ENST00000237186 TBX5Q99593 518 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 HOXD1Q9GZZ0 328 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 SLC22A4Q9H015 551 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 ERVMER34-1Q9H9K5 563 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 COLQQ9Y215 455 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-201ENST00000237186 OR10H1Q9Y4A9 318 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms