RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 NUP188Q5SRE5 1749 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 C20orf202A1L168 122 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 ANHXE9PGG2 379 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 CFDP00746 253 aaPredicted RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 GPX2P18283 190 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 PIN1Q13526 163 aaPredicted RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 NKPD1Q17RQ9 610 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 ARHGAP11AQ6P4F7 1023 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 FAM26EQ8N5C1 309 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 POLR1DQ9Y2S0 133 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 MED31Q9Y3C7 131 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 URGCP-MRPS24S4R325 110 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 MYH14Q7Z406 1995 aaKnown RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 ECM29Q5VYK3 1845 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 DNASE2O00115 360 aaPredicted RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 CCR4P51679 360 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 PCBP4P57723 403 aaKnown RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 RANP62826 216 aaKnown RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 GGNBP1Q5YKI7 109 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 ASPGQ86U10 573 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 MCHR1Q99705 422 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 NIPSNAP3BQ9BS92 247 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 SLC25A18Q9H1K4 315 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 TAF9BQ9HBM6 251 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 NRIP3Q9NQ35 241 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 MED17Q9NVC6 651 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 MEIS3P1A6NDR6 274 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 MEIS3P2A8K0S8 358 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 A8MXK9 166 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 MPC2O95563 127 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 NFATC1O95644 943 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 ITPKBP27987 946 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 HOXA9P31269 272 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 RABGGTBP53611 331 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 BACE1P56817 501 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 PODNL1Q6PEZ8 512 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 AKR1E2Q96JD6 320 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 CCDC74BQ96LY2 380 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 SLC25A21Q9BQT8 299 aaPredicted RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 HAPLN2Q9GZV7 340 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 ZFP64Q9NPA5 681 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 SLC6A14Q9UN76 642 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 UBR1Q8IWV7 1749 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SOCS7O14512 581 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 B4GALT3O60512 393 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 NDUFS6O75380 124 aaKnown RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 RAB5AP20339 215 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 TLX1P31314 330 aaPredicted RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 PLA1AQ53H76 456 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SYT14P1Q58G82 188 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 MS4A13Q5J8X5 152 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SUSD1Q6UWL2 747 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 MEPCEQ7L2J0 689 aaKnown RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 LRRTM1Q86UE6 522 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 C17orf64Q86WR6 236 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 FBXO16Q8IX29 292 aaPredicted RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 TEX19Q8NA77 164 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 ASIC5Q9NY37 505 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 KCNK7Q9Y2U2 307 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 PCDHGA5Q9Y5G8 931 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 H7BY64 318 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 CYB5BO43169 146 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 FZD6O60353 706 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 GPR4P46093 362 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 PITX1P78337 314 aaPredicted RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 IQCJQ1A5X6 159 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 MPPE1Q53F39 396 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 TRNP1Q6NT89 227 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 FUT10Q6P4F1 479 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 LFNGQ8NES3 379 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SMIM4Q8WVI0 70 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 PCED1BQ96HM7 432 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 MRIQ9BWK5 157 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 DUXAA6NLW8 204 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 USP2O75604 605 aaPredicted RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SCAF4O95104 1147 aaKnown RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 OR13C7P0DN81 318 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 CR2P20023 1033 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 ATP5A1P25705 553 aaKnown RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 EPHB3P54753 998 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 F2RL1P55085 397 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 LTBQ06643 244 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SOX4Q06945 474 aaPredicted RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 PUSL1Q8N0Z8 303 aaKnown RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 OR5T1Q8NG75 326 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 TIFAQ96CG3 184 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 ANKRD12Q6UB98 2062 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 A0A1B0GVT2 93 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 H3BRB1 525 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SLBPQ14493 270 aaKnown RBP eCLIP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 HNF4GQ14541 408 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SGCAQ16586 387 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 TP53I3Q53FA7 332 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 ADIPOR2Q86V24 386 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 PPP1R3BQ86XI6 285 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 FAM24BQ8N5W8 94 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 PNPLA1Q8N8W4 532 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SMARCD2Q92925 531 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms