RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 PRR23D1E9PI22 279 aaPredicted RBP17.57■□□□□ 0.4
YBX3-201ENST00000228251 LOC110117498-PIK3R3F6TDL0 507 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 DUX1O43812 170 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 PRR23D2P0DMB1 279 aaPredicted RBP17.57■□□□□ 0.4
YBX3-201ENST00000228251 GTF2E2P29084 291 aaKnown RBP17.57■□□□□ 0.4
YBX3-201ENST00000228251 SLC6A6P31641 620 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 SLC9A3P48764 834 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 COPZ1P61923 177 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 CRYZQ08257 329 aaKnown RBP17.57■□□□□ 0.4
YBX3-201ENST00000228251 DMWDQ09019 674 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 CRMP1Q14194 572 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 CRTC2Q53ET0 693 aaPredicted RBP17.57■□□□□ 0.4
YBX3-201ENST00000228251 SPANXN2Q5MJ10 180 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 AGAP7PQ5VUJ5 663 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 PLXDC1Q8IUK5 500 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 ZNF440Q8IYI8 595 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 CADM2Q8N3J6 435 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 ZNF721Q8TF20 911 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 DNAJA4Q8WW22 397 aaPredicted RBP17.57■□□□□ 0.4
YBX3-201ENST00000228251 ADIPOR1Q96A54 375 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 C1GALT1C1Q96EU7 318 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 KATNB1Q9BVA0 655 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 INPP5EQ9NRR6 644 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 IGKV1D-42A0A075B6H8 117 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 POLR1CO15160 346 aaPredicted RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 OIP5O43482 229 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 FOLR1P15328 257 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 GALP22466 123 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 SDC2P34741 201 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 SEPHS1P49903 392 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 GPLD1P80108 840 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 CSTF1Q05048 431 aaKnown RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 DBPQ10586 325 aaPredicted RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 SKP2Q13309 424 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 GPR50Q13585 617 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 CD226Q15762 336 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 FAM181AQ8N9Y4 354 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 AHCYL2Q96HN2 611 aaKnown RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 LRFN5Q96NI6 719 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 CCNL2Q96S94 520 aaPredicted RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 CCDC32Q9BV29 185 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 HOXD1Q9GZZ0 328 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 NXF5Q9H1B4 397 aaKnown RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 MIXL1Q9H2W2 232 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 ISG20L2Q9H9L3 353 aaKnown RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 ADGRL4Q9HBW9 690 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 EXOSC3Q9NQT5 275 aaKnown RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 TOR4AQ9NXH8 423 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 DHCR7Q9UBM7 475 aaKnown RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 COLQQ9Y215 455 aaPredicted RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 A0A1B0GVT2 93 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 TCRBV16S1A1N1A0A5B0 115 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 RIIAD1A6NNX1 92 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 PRKNO60260 465 aaPredicted RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 IGF2P01344 180 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 HK1P19367 917 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 RPS4XP62701 263 aaKnown RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 GALEQ14376 348 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 PRAMEF17Q5VTA0 474 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 ARHGAP11AQ6P4F7 1023 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 APOOLQ6UXV4 268 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 SLITRK4Q8IW52 837 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 TMEM151BQ8IW70 566 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 SLC2A12Q8TD20 617 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 EFHD2Q96C19 240 aaPredicted RBP17.56■□□□□ 0.4
YBX3-201ENST00000228251 UBQLN4Q9NRR5 601 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 CABIN1Q9Y6J0 2220 aa17.56■□□□□ 0.4
YBX3-201ENST00000228251 FRG2CA6NGY1 282 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 HNRNPCP07910 306 aaKnown RBP eCLIP17.55■□□□□ 0.44e-7■□□□□ 9.3
YBX3-201ENST00000228251 SBK2P0C263 348 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 PAICSP22234 425 aaKnown RBP17.55■□□□□ 0.4
YBX3-201ENST00000228251 CXCL12P48061 93 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 PPM1FP49593 454 aaPredicted RBP17.55■□□□□ 0.4
YBX3-201ENST00000228251 HNRNPA0Q13151 305 aaKnown RBP17.55■□□□□ 0.4
YBX3-201ENST00000228251 ZNF79Q15937 498 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 FCRLBQ6BAA4 426 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 WDR74Q6RFH5 385 aaPredicted RBP17.55■□□□□ 0.4
YBX3-201ENST00000228251 KMT5CQ86Y97 462 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 KLBQ86Z14 1044 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 LAX1Q8IWV1 398 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 OR4C6Q8NH72 309 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 NACC2Q96BF6 587 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 SGTBQ96EQ0 304 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 DDOQ99489 341 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 ALG8Q9BVK2 526 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 SLC19A3Q9BZV2 496 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 CPNE5Q9HCH3 593 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 MKKSQ9NPJ1 570 aaPredicted RBP17.55■□□□□ 0.4
YBX3-201ENST00000228251 PNO1Q9NRX1 252 aaKnown RBP17.55■□□□□ 0.4
YBX3-201ENST00000228251 RPS6KB2Q9UBS0 482 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 FBXL4Q9UKA2 621 aa17.55■□□□□ 0.4
YBX3-201ENST00000228251 SIRT4Q9Y6E7 314 aaPredicted RBP17.55■□□□□ 0.4
YBX3-201ENST00000228251 NDUFB2O95178 105 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 CLUP10909 449 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 ZNF3P17036 446 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 CELP19835 753 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 RORAP35398 523 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 ATP6V1E1P36543 226 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 MXD1Q05195 221 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 ELAVL1Q15717 326 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms