RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 TEX46H3BTG2 121 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 ADAM11O75078 769 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 IFNA7P01567 189 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 ACRP10323 421 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 SAGP10523 405 aaPredicted RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 BMP7P18075 431 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 BLVRAP53004 296 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 ARFIP1P53367 373 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 CLDN12P56749 244 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 ELAVL3Q14576 367 aaKnown RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 SUZ12Q15022 739 aaKnown RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 MRPL2Q5T653 305 aaKnown RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 KIAA1324Q6UXG2 1013 aaKnown RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 ASPGQ86U10 573 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 GPALPP1Q8IXQ4 340 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 TMEFF1Q8IYR6 380 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 OR2L3Q8NG85 312 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 MOAP1Q96BY2 351 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 BPIFA2Q96DR5 249 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 ZMYND19Q96E35 227 aaPredicted RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 SPRTNQ9H040 489 aaPredicted RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 CLEC4MQ9H2X3 399 aaPredicted RBP11.46□□□□□ -0.57
NUP88-201ENST00000225696 LRRN3Q9H3W5 708 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 FN3KQ9H479 309 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 CALML5Q9NZT1 146 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 KLK11Q9UBX7 282 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 SCP2D1Q9UJQ7 156 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 NPTNQ9Y639 398 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 STON1Q9Y6Q2 735 aa11.46□□□□□ -0.57
NUP88-201ENST00000225696 A0A1W2PPL8 197 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 TRAPPC13A5PLN9 417 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 IDSB3KWA1 339 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 PRICKLE3O43900 615 aaPredicted RBP11.45□□□□□ -0.58
NUP88-201ENST00000225696 RNGTTO60942 597 aaKnown RBP11.45□□□□□ -0.58
NUP88-201ENST00000225696 GATBO75879 557 aaKnown RBP11.45□□□□□ -0.58
NUP88-201ENST00000225696 CXCL2P19875 107 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 RAD52P43351 418 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 MAP2K6P52564 334 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 NRG3P56975 720 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 RPS15P62841 145 aaKnown RBP11.45□□□□□ -0.58
NUP88-201ENST00000225696 CDH24Q86UP0 819 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 SLC51BQ86UW2 128 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 CMIPQ8IY22 773 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 OR56B4Q8NH76 319 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 GRHL3Q8TE85 626 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 PELI1Q96FA3 418 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 TNFRSF13CQ96RJ3 184 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 SARGQ9BW04 601 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 FKRPQ9H9S5 495 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 IL21RQ9HBE5 538 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 RPS6KB2Q9UBS0 482 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 PCDHGA9Q9Y5G4 932 aaKnown RBP11.45□□□□□ -0.58
NUP88-201ENST00000225696 NPFFR2Q9Y5X5 522 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 RNF215Q9Y6U7 377 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 EDDM13A0A1B0GTR0 161 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 SLC22A31A6NKX4 558 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 PEX14O75381 377 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 ALDOBP05062 364 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 NGFRP08138 427 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 UGT2B7P16662 529 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 NAT1P18440 290 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 PSMB10P40306 273 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 NAA10P41227 235 aaPredicted RBP11.45□□□□□ -0.58
NUP88-201ENST00000225696 FHL1Q13642 323 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 GAB4Q2WGN9 574 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 TCTE1Q5JU00 501 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 HES5Q5TA89 166 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 GARNL3Q5VVW2 1013 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 VN1R4Q7Z5H5 301 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 ETFBKMTQ8IXQ9 262 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 OR52I2Q8NH67 350 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 SMIM4Q8WVI0 70 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 LINC00052Q96N35 136 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 GSX2Q9BZM3 304 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 SLC25A18Q9H1K4 315 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 WDR26Q9H7D7 661 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 HRASLSQ9HDD0 168 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 PIPOXQ9P0Z9 390 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 SERGEFQ9UGK8 458 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 ATG2BQ96BY7 2078 aa11.45□□□□□ -0.58
NUP88-201ENST00000225696 A0A1B0GVI7 797 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 M0R233 179 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 PSMD9O00233 223 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 MID1O15344 667 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 PIN1P1O15428 100 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 FLRT2O43155 660 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 PCDH8O95206 1070 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 PAK4O96013 591 aaPredicted RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 ZNF888P0CJ79 500 aaPredicted RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 CSF2RAP15509 400 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 EPCAMP16422 314 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 NT5EP21589 574 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 LCN1P31025 176 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 GDI2P50395 445 aaKnown RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 VASPP50552 380 aaPredicted RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 CCR9P51686 369 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 TSPAN5P62079 268 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 FGL2Q14314 439 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms