RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 ATP12AP54707 1039 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 RPS3AP61247 264 aaKnown RBP13.91□□□□□ -0.18
PAF1-201ENST00000221265 RNF4P78317 190 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 DNASE1L3Q13609 305 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 GINS1Q14691 196 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 ZNF141Q15928 474 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.91□□□□□ -0.18
PAF1-201ENST00000221265 EIPR1Q53HC9 387 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 C3orf38Q5JPI3 329 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 ACSM5Q6NUN0 579 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 TUBA3EQ6PEY2 450 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 PLEKHG7Q6ZR37 379 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 SLC29A4Q7RTT9 530 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 LINC00471Q8N535 108 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 ZNF441Q8N8Z8 693 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 C7orf57Q8NEG2 295 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 PMM1Q92871 262 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 TAAR9Q96RI9 348 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 ADOQ96SZ5 270 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 PRRX2Q99811 253 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 SEMA4CQ9C0C4 833 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 HHATLQ9HCP6 504 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 QPCTLQ9NXS2 382 aa13.91□□□□□ -0.18
PAF1-201ENST00000221265 MPDZO75970 2070 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 C9J4A7 227 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 TAF4O00268 1085 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 TLX2O43763 284 aaPredicted RBP13.9□□□□□ -0.18
PAF1-201ENST00000221265 ZNF354AO60765 605 aaPredicted RBP13.9□□□□□ -0.18
PAF1-201ENST00000221265 IL33O95760 270 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 SCG5P05408 212 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 GUSBP08236 651 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 PCYT1AP49585 367 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 EFNB1P98172 346 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 CDK5Q00535 292 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 HLA-DQA1Q5Y7H0 255 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 APOOLQ6UXV4 268 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 MEX3DQ86XN8 651 aaKnown RBP13.9□□□□□ -0.18
PAF1-201ENST00000221265 KIF18BQ86Y91 864 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 SLC34A3Q8N130 599 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 FAM26EQ8N5C1 309 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 FGF11Q92914 225 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 POLDIP3Q9BY77 421 aaKnown RBP13.9□□□□□ -0.18
PAF1-201ENST00000221265 POLE4Q9NR33 117 aa13.9□□□□□ -0.18
PAF1-201ENST00000221265 DNAJB12Q9NXW2 375 aaKnown RBP13.9□□□□□ -0.18
PAF1-201ENST00000221265 A0A087WUU8 490 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 CCDC187A0A096LP49 1063 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 AP3D1O14617 1153 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 UPK1BO75841 260 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 RPS18P62269 152 aaKnown RBP13.89□□□□□ -0.19
PAF1-201ENST00000221265 TIMM50Q3ZCQ8 353 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 PLEKHM3Q6ZWE6 761 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 GLRX5Q86SX6 157 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 SLC22A16Q86VW1 577 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 NKAIN4Q8IVV8 208 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 GATSQ8NAP1 163 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 DEPDC7Q96QD5 511 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 LPAR4Q99677 370 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 SPRY4Q9C004 299 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 NXT1Q9UKK6 140 aaKnown RBP13.89□□□□□ -0.19
PAF1-201ENST00000221265 TRBV11-1A0A0K0K1C0 115 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 OR6C76A6NM76 312 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 REM1O75628 298 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 CYP7B1O75881 506 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 UTS2O95399 124 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 DLGAP3O95886 979 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 ABCD3P28288 659 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 SOX3P41225 446 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 FGFBP1Q14512 234 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 SPHARQ15513 63 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 SLC25A30Q5SVS4 291 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 RNLSQ5VYX0 342 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 PAQR6Q6TCH4 344 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 HSDL2Q6YN16 418 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 GDF7Q7Z4P5 450 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 NANOGP1Q8N7R0 232 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 RNF217Q8TC41 542 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 DDA1Q9BW61 102 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 PLA2G12AQ9BZM1 189 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 RTN4RQ9BZR6 473 aa13.89□□□□□ -0.19
PAF1-201ENST00000221265 PPIEQ9UNP9 301 aaKnown RBP13.89□□□□□ -0.19
PAF1-201ENST00000221265 TMEM200CA6NKL6 621 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 C17orf51A8MQB3 221 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 OIP5O43482 229 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 ICOSLGO75144 302 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 CELA2AP08217 269 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 SLC26A5P58743 744 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 DCAF7P61962 342 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 PRKCDQ05655 676 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 PCOLCEQ15113 449 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 CD226Q15762 336 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 KLHL26Q53HC5 615 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 SYT14P1Q58G82 188 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 C6orf15Q6UXA7 325 aaPredicted RBP13.88□□□□□ -0.19
PAF1-201ENST00000221265 PRICKLE2Q7Z3G6 844 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 LYSMD2Q8IV50 215 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 OR2Y1Q8NGV0 311 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 SLC41A3Q96GZ6 507 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 ZNF582Q96NG8 517 aaPredicted RBP13.88□□□□□ -0.19
PAF1-201ENST00000221265 EGLN3Q9H6Z9 239 aa13.88□□□□□ -0.19
PAF1-201ENST00000221265 ABCB10Q9NRK6 738 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms