RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 TOLLIPQ9H0E2 274 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 FGF20Q9NP95 211 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 GFOD1Q9NXC2 390 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 NOP16Q9Y3C1 178 aaKnown RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 A0A0C4DFX4 3053 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 A6NLC8 198 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 TCAPO15273 167 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 HYAL3O43820 417 aaPredicted RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 CLDN7O95471 211 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 ATP1B1P05026 303 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 EPXP11678 715 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 TYRP14679 529 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 AOAHP28039 575 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 OPRD1P41143 372 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 BRIX1Q8TDN6 353 aaKnown RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 TMED6Q8WW62 240 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 GHSRQ92847 366 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 KLK6Q92876 244 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 DVL3Q92997 716 aaPredicted RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 PNPLA2Q96AD5 504 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 MOKQ9UQ07 419 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 A0A0A6YYC8 382 aaPredicted RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 ARGFXA6NJG6 315 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 A8MVJ9 347 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 I3L1I5 382 aaPredicted RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 ADCYAP1P18509 176 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 GRK4P32298 578 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 RHOAP61586 193 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 PPIAP62937 165 aaKnown RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 AIMP2Q13155 320 aaKnown RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 SPICQ8N5J4 248 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 SIRT6Q8N6T7 355 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 INO80EQ8NBZ0 244 aaPredicted RBP13.63□□□□□ -0.23
PTPRA-201ENST00000216877 C17orf47Q8NEP4 570 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 GPR32P1Q8NGA4 272 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 RGMAQ96B86 450 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 C4orf36Q96KX1 117 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 AQP8O94778 261 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 RHOCP08134 193 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 ARAFP10398 606 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 IRF1P10914 325 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 CERS6Q6ZMG9 384 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 FAM71CQ8NEG0 241 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 DNAAF1Q8NEP3 725 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 OR6K3Q8NGY3 331 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 GGACTQ9BVM4 153 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 WDR13Q9H1Z4 485 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 ZFYVE1Q9HBF4 777 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 SMCO4Q9NRQ5 59 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 PLXNB2O15031 1838 aa13.63□□□□□ -0.23
PTPRA-201ENST00000216877 MANSC4A6NHS7 340 aaPredicted RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 PSMD9O00233 223 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 PMP2P02689 132 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 GYPBP06028 91 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 ALPPL2P10696 532 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 MGMTP16455 207 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 GABRR2P28476 465 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 LAP3P28838 519 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 PBLDP30039 288 aaPredicted RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 OR12D2P58182 307 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 RIPPLY1Q0D2K3 151 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 DUSP28Q4G0W2 176 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 LRRC73Q5JTD7 316 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF626Q68DY1 528 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 TEX26Q8N6G2 289 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 OR1J4Q8NGS1 313 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 TRPV4Q9HBA0 871 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 WASF3Q9UPY6 502 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 BTBD17A6NE02 478 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 HMSDA8MTL9 139 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 AKR1A1P14550 325 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 NTSP30990 170 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 HOXC13P31276 330 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 LIMS1P48059 325 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 EPHA4P54764 986 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 NDUFA6P56556 154 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 SYPL1Q16563 259 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 DHRS7BQ6IAN0 325 aaPredicted RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 ZC3H14Q6PJT7 736 aaKnown RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 CYB561A3Q8NBI2 242 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 OR4E2Q8NGC2 313 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 TMEM40Q8WWA1 233 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 ACTL6AO96019 429 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 MT-ND5P03915 603 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 MMP3P08254 477 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 VSIG10L2P0DP72 767 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 GTF2F2P13984 249 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 CD52P31358 61 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 MAGEB1P43366 347 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 ELAVL1Q15717 326 aaKnown RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 TP53I3Q53FA7 332 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 PRAMEF17Q5VTA0 474 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 PAPD4Q6PIY7 484 aaKnown RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 TPRA1Q86W33 373 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 FOXRED2Q8IWF2 684 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 THEM5Q8N1Q8 247 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 AVL9Q8NBF6 648 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms